Tigriopus californicus (tidepool copepod): 131893656
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Entry
131893656 CDS
T09700
Name
(RefSeq) protocadherin-like wing polarity protein stan
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcf01002
]
131893656
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tcf04030
]
131893656
04515 Cell adhesion molecules [BR:
tcf04515
]
131893656
Peptidases and inhibitors [BR:
tcf01002
]
Mixed peptidases
Family P2
131893656
G protein-coupled receptors [BR:
tcf04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
131893656
Cell adhesion molecules [BR:
tcf04515
]
Cadherins
Major cadherins
131893656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Laminin_G_2
7tm_2
Laminin_G_1
EGF
Cadherin_2
Fibulin_C
EGF_laminin
hEGF
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
131893656
NCBI-ProteinID:
XP_059099743
LinkDB
All DBs
Position
2:complement(12918143..12926243)
Genome browser
AA seq
2471 aa
AA seq
DB search
MVKTKASVLVATLLVQFAVLEGLKFPQDAYQVSVLENVTQNALLLNLHVDHVVGDVLYEM
LPKKDSRSAQFFKVIPNNGSVMTCANLDREFMASHEFSIIAKSGDRTTSTILSIKVLDIN
DNPPIFESDYYNVSIHESTAVGTSLLTFQATDLDEGDNGKVSYSILSGAGSDHLFQVDSA
TGVLVLTSPLNHEVKFEHILTVYAKDNAKDPRDVQVASAKLLLNVLDDNDNFPIFDQDDY
SFDVFENKTFDDNPSVGKVLARDMDSGNNADLRYSIIGGNNHGNFKIDPENGAIFLSGPL
DREGLTKYNLLIRAQDSGNPPKSNTTNAVINVLDVNDNPPSFPTGEYYQSISENAPAGFS
LIQIKAFDPDQGNNAKIEYSISNIGDVPFMIEANTGWLVTDRKLDREKRQNFHLDIEAQD
DGIPPMIATAAILIDVIDANDNDPRFEQKEYILSITETTSIGKTILMLKALDTDEDSSLR
YELVSGNKRNRFTLSTKDNFGILSVAQPLDFQQENKYILTVNAVDEGGRFGTCMVIIDIK
DANNHAPRFEKTPYFSDVFEDTPMGSTVLMVYASDKDFGDNAAIKYRLKSPSRYFSIDPT
SGAIVITDRLDRESKSTHVFTVVASDQGNPPQQDSTDVEISVIDVNDNEPIFRKQSYSGS
LLENAPIGTKILRVQADDPDENANGEVSFFFAEDVPDFVIDPHSGDIRSSQMLDREQRAS
YNLVVLAMDGGEPKKTSQIAIKIDVMDINDNPPVFSNDSLVFHLAENSPYGTKIGKIFVD
DPDSSENAQISFFMLSSPDSEFFYLDDFDRSGGISLFAKRDFDYELDRREFKIGIRAESP
PLQTDTTVTILLDDINDNEPELRDFHLVYNLKDNEYSYESLGKIPAHDPDPTSQLRYSIT
SGNTAKLLILDEFTGEIRLSPHIQTNIDIVNEIGVMVSDGQNEARATLFFQMNRITDNML
SNSVTLQVVNVTIPNFLNVYMEHFKEALVIAVSCKKEDVVLLGIKGTQEDSHVVNATFSI
RQESHFNNVYISPSVIKQMIYLQMGIFKQISRLDILPFSDDVCVKEPCLNFEHCLTVPKF
GSTLEIFEEPNVRFRSIETLLTYSCFCPSGFTGLTTRYTCDTKIDLCYSSPCQNGGICSA
TESGYYCECPRGFRGQNCEIEDLPPDLDCDTCSEECRNLTAKAKACPGSVDNSRGFQNGS
FLAFPGITNRVEFKISLSFATLFKNGLLFYNGRLTDNDDFIKLELFDDVLYFQFSTGNFK
RSVSLTSEFGFSNGKFHQVEVQYSSGNARISINDCDTKLFTKYGPKITNQAQCTNATNPD
QNLLKCGSFLNHCPKFLDLNGPLMMGGLPLWISSKTSMTFFNGCIRDIYVDDVPVPMDSA
LLGQRVSKGCLQKKDFCVSSPCQNEGICSNRWNGFNCQCQDGFTGKECSKIPAKSYGLIR
NSGLQYEIGSERIKYPWHHSVSFKTKSGTAKLLQVNMDEKVVSLLKLVDGHVFYDFGGST
MLKLQDKVNDGFWHNLEVKWMRNEIWVNLDYGALEQTIKTEANVEGKVVTTVVNAMPLQN
FITGCVRDLTMMGQHESNLKILRQENLTDCSLTPLHADLTKCSLEMEGQCTSYCSLELCH
ESSTCLEDSDGYKCLCSSSRDTKLDKYCYPTFVQSVCPRHWWGTPICGPCNCDTTKGFNE
TCHSLTGACQCKAFHFYSVTDDLCRPCDCSSLGSISSECDAKTGQCQCKNGIIGRQCNTC
ANQFAELSATGCAAVYGSCPSERRDGIRWERTEFGAGSQEACPDSSHGRVVRNCSTSGWE
EPDFRGCTHRALLKLTGVTVINDSTLFIHTLKDAIPESPERIFKNDIEIVSSMLEKIMAK
EKKLIGFQLGHRRDRDFLENLIEMFAWILSHQTNIADYVKTILVLNEYGTKLATTMEDTL
TKPQKVIQSNLIFALDKAPSCNLQDKNQSPYVGQDNMGYSWGDWKTYFCIPKNQSAYQYT
TVQPLNHTILTKDVMMPSIRKDSYLTYFSNIVSFVRLLNNFENDGSFHHIFKGKKRFGRN
QLHCALWEEELRVWNSLPCETSVEDEDALGFSNVHCLCSPHKEVIVVVEEHLKKGKIFFT
YEQEGIQFLVVSGVSILLLVLSLIYLVFFGSRTLNTTHIAINIITNILIFQVAFILSLVY
NDVLSESMSLCKLIAIVFHYTSIAMFTWTFINSLHIYRMITELRDINRGLMPFYYAIGLG
APAIAVLLTMGVTGRSYHSAQFCWFDFTGAAMWAMLGPEILLVFFSIICTMKNIRTVVNT
TKGMSDFHLIRRRFFVNLGLIPLITAFHVSSLLLLNQGSLSNSVTSISFQIISVIIAVFV
AYGFVYYESQANTKHSSRTSPASKSSGAVKSALIYTQPHHHPVSEVSAMDNLSRNISVAS
TTSYSTTSQKKSGTKDIYNCYYTDSESDLDRRSIQLASSHSSDEDNPIPPSNGHHRTYEN
RLVVNDKPNHS
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagactaaagccagtgtgttagtggcgacacttctggtgcaatttgccgtgttg
gaaggcctgaagtttcctcaggatgcttatcaagtgtcagtgttggaaaatgtgacccag
aatgctttgttactcaaccttcacgtggaccatgtcgtcggggatgttttgtatgagatg
cttcccaagaaggatagccggtcggctcagttcttcaaagtgatccctaataatggatcc
gtgatgacttgtgccaatctggaccgggaattcatggccagtcacgagttttcaatcatc
gccaagagtggggatcggacaacctcgaccatcttgtctatcaaagtacttgatatcaac
gataatccaccaatctttgagtcggactattacaatgtgtccatacacgaaagcaccgcg
gttggaacgtctttactgacgtttcaagccacagacttggatgaaggggacaatggcaaa
gtatcttacagtatcctcagtggagctggttccgaccatttgtttcaggttgattcggcc
actggagtgctagtccttacgtcacccttgaaccatgaggtcaagtttgagcatattctc
accgtttatgccaaagataacgcaaaagacccaagagacgttcaagttgcttcggccaag
ttgttactgaacgtgctggacgacaacgacaacttccccatctttgatcaagatgactac
tcgtttgacgtctttgagaacaaaacttttgatgacaatccatccgtgggcaaggtttta
gctcgggacatggattccggaaacaatgctgacctgagatattcaatcattggcggcaat
aaccatgggaacttcaagattgaccccgaaaacggggcaattttcctctcgggtccttta
gacagagaaggtctcacaaagtacaaccttctaattcgtgcacaagactctggcaatcct
cccaaatccaataccaccaatgcagtcatcaacgtgcttgatgtcaacgacaaccctcct
tcgttcccaaccggtgaatactaccaaagcatctctgaaaatgctccagctggcttctcc
ttgatacaaatcaaggcctttgatcctgaccaaggcaacaatgccaaaatagaatattcc
atatccaacattggagatgttcctttcatgatagaggctaacactgggtggctggtaacc
gatcgaaaattggatcgggagaaacgtcaaaactttcatctggatattgaggctcaagat
gacggaattccacccatgattgccacagctgccattcttattgatgtcattgacgccaat
gacaacgatcctcgatttgaacagaaggagtacattctgtcaattacagaaacgactagc
attggcaagaccatattgatgttgaaagctctggacacggacgaggattcttcattgcga
tatgagttggtgagtgggaacaagaggaatcgcttcactctctccactaaggacaatttt
ggcatcctgtcagtggcccaaccattggacttccagcaagaaaacaagtacatcttgacg
gtgaatgctgttgatgagggtggacgatttggtacatgcatggtcatcattgacatcaag
gacgccaataaccatgcgcctagatttgaaaagactccttacttttcggatgtgtttgaa
gacactcccatgggatccaccgttctcatggtgtacgcgtcagataaagactttggtgac
aatgcagccatcaaataccggttgaagtccccaagcagatattttagcattgatcccacg
tcaggagcaattgtcatcactgatagactcgatcgcgaatccaaatctacccacgtgttc
actgtggttgcttcagaccaaggcaaccctccccaacaagactcgactgatgttgaaatc
tccgttatcgacgtgaatgacaatgaaccaattttcaggaaacagagttattcaggatct
ctcttggaaaatgcaccgattggcaccaaaatcctccgggttcaagcggacgatcctgat
gaaaatgccaatggtgaagtgtcgttcttttttgctgaggatgttccagattttgtcatt
gatccacattcaggagacattcgatccagtcagatgttggatcgggagcagcgtgcttcc
tacaatctagttgttctggccatggatggtggtgagcctaagaagacctctcaaattgcg
attaagattgacgtcatggacatcaatgacaatccacctgtgttttccaacgactctctg
gttttccacttagccgagaattctccatatggcaccaagatagggaagatctttgtcgat
gatcctgatagctccgagaatgctcaaatttccttctttatgctgagttcgcctgacagc
gagttcttctatcttgatgactttgatcgaagtgggggaatctccctcttcgctaaacgc
gactttgattatgaattggatcgaagggagtttaagattgggattcgagcagaatcacca
ccattgcagacggatacaactgtcaccatcctcctcgatgatatcaatgacaacgaacca
gagctcagagacttccatcttgtctacaatctgaaggacaacgaatactcctatgaaagc
ctgggaaagatcccagcccatgaccctgatcctacatcgcaactgaggtattccatcaca
tcagggaacaccgccaaactcttgattctcgatgagttcactggggaaatccgtctctct
cctcacattcaaacaaatatcgatatcgtcaatgagattggtgtcatggtgtcggatgga
caaaacgaagcccgagccactctgttcttccagatgaaccgcatcactgataatatgctg
tcgaactcggtaactcttcaggtggtcaatgtaaccattccaaactttcttaatgtctac
atggagcacttcaaagaagccttggttatcgctgtttcatgcaagaaggaagacgtggtc
cttttggggatcaaaggtacacaagaagatagccacgtagtcaatgcaacgtttagtatt
cgacaagaatcccatttcaacaacgtgtacatctctccaagcgtaatcaagcaaatgatc
tatcttcaaatgggaattttcaaacaaatctccagattggatatattacctttttccgat
gatgtttgcgtgaaagagccctgcttgaatttcgaacattgtctcaccgttccaaagttt
ggcagcacattagagatctttgaggagcccaatgtgcgcttccgatccatagaaactttg
ttgacgtattcttgtttctgtccttctggtttcactggtttgaccacccggtacacctgt
gacacaaagatcgacctttgttattcgagcccttgtcaaaatggtgggatctgttccgcc
accgaatctggttactattgtgaatgtcccaggggattccgaggacaaaactgcgaaata
gaggacctccctccagatctggattgcgatacgtgttctgaagaatgtagaaatctcacg
gcaaaagccaaagcctgtcctggttctgttgacaactcccgagggttccaaaatggatcg
tttcttgcatttcctgggatcaccaacagagtcgagttcaaaatctccctcagttttgcc
actttgttcaagaatggccttcttttttacaacggccgtctgactgacaatgatgacttt
atcaagttagagctgtttgacgatgttctatacttccaattctccaccgggaatttcaag
cgctcagtttctctcacttctgagtttggattctccaatggcaagttccatcaagtagaa
gtccaatacagctctgggaacgcgagaatctccattaatgattgtgacacgaaactcttc
accaaatatggacccaagattacgaaccaagctcaatgcaccaacgctactaatcctgac
caaaacctactcaaatgtggatctttcttgaaccattgtcccaagttcctagatctcaat
ggcccacttatgatgggaggactgcccttatggatctcttccaagacgagcatgaccttt
tttaatggctgtattcgtgacatctacgttgacgatgtgcctgttccaatggactctgcc
cttttgggacaacgagtctccaaaggctgtttgcaaaagaaggacttttgcgtctcaagt
ccgtgtcaaaacgaagggatttgttccaatcgatggaatggcttcaattgccaatgtcag
gatggattcacaggaaaagaatgctccaagatcccagctaaatcgtacggcctcatccgc
aattccggactacaatatgaaattggatctgaacgcatcaaatacccttggcaccattct
gtgtcattcaagactaaatctggaactgccaaattattgcaagtcaacatggacgagaaa
gtggtttcactcttaaaattggtggacggacacgtgttttatgatttcgggggaagtact
atgctcaaactccaagacaaagtcaacgatgggttctggcacaacttggaagtcaaatgg
atgcgaaacgagatttgggtcaacttggattatggagccttggaacaaacaatcaagact
gaagctaacgtagaaggcaaggtcgtgaccaccgttgttaacgccatgcccttgcaaaac
tttatcaccggatgcgtgagagatttgacaatgatgggacaacatgagagcaacttaaag
atcttgcgccaagaaaacctcacagactgctccttgactcctcttcacgcagatttgacc
aagtgctccttggaaatggagggtcaatgtacttcttattgctctttggaactatgccac
gaatcaagcacttgcctggaggacagtgatgggtacaaatgtttgtgcagctcgtcccgg
gacactaaattagacaagtattgctatccgacctttgtacaatcagtgtgccctcggcat
tggtggggaacccctatttgtggtccttgcaattgtgacaccaccaaagggttcaatgaa
acatgccactcgttgacgggtgcatgccaatgcaaagcgttccatttctactctgtgact
gatgacctttgtcgcccttgtgactgtagcagcctcggctccatttcaagtgaatgcgat
gccaaaaccggccaatgtcaatgcaaaaatggaatcataggtcggcaatgcaacacttgc
gccaaccagtttgctgagctttccgctacaggttgcgcagcggtttatggatcgtgtcca
agtgagaggagagatgggatccgatgggagcgcaccgagtttggagcaggctcccaagag
gcttgtccagactcctctcatggaagagtggtgcgaaactgctccacttcagggtgggag
gaaccagacttcagaggctgtacacatcgagcattattgaagctcactggagtgactgtt
atcaacgactcgacccttttcatccacaccttgaaggacgccattccagagtctccggaa
cgaatcttcaaaaatgacattgaaattgtctcctctatgctagagaagatcatggccaag
gagaagaagctcattggttttcaattgggacatcgccgagatcgggacttcttggagaat
ttgattgaaatgtttgcttggattttgagccatcaaaccaatattgcagactatgtgaaa
accattcttgtgcttaatgagtatggaaccaaattggccacaaccatggaagacactttg
actaaacctcaaaaagtaattcagtccaatctcatatttgccttggacaaggcccccagt
tgcaatcttcaagacaagaaccagtcgccttacgttggtcaagataacatgggatactca
tggggagactggaagacctacttttgcattccaaagaaccagagcgcctaccaatacacc
actgtgcaaccattgaaccacaccatcttaaccaaagatgttatgatgccgtccattcgg
aaggattcctacctcacttatttctcgaacatcgtctcgtttgtccgattgctcaacaac
ttcgaaaatgatggctcttttcatcatattttcaagggtaaaaaaagattcgggcggaat
cagctccattgcgcactttgggaggaggaacttcgcgtttggaactctcttccatgtgag
accagcgtagaggacgaggatgcgttgggattctccaatgtccattgcctttgcagccct
cacaaagaagttattgtggttgtagaggagcacctcaaaaagggaaagatcttcttcacg
tatgaacaagagggtattcagttcttggtggtgtcaggggtgtctatcctcctattggtg
ttgtctctcatctatttggtgttctttggctctcggacactgaacacgactcacattgcg
attaatattattaccaatattttgatcttccaagtcgcattcatcctctctcttgtctac
aatgatgtcttgtcggagagcatgagcttatgcaagctgatcgccatcgtgttccattac
accagtattgccatgttcacttggaccttcatcaactcccttcacatctaccgaatgatc
accgagctccgggacatcaatcgaggactaatgccattttactacgccatcggtttgggc
gcccctgccatcgctgttcttcttacaatgggtgtgaccggtagaagctatcatagtgca
caattttgttggtttgacttcacgggagccgctatgtgggcaatgcttggtcctgagatc
ctgttggtgttcttttccatcatttgtaccatgaaaaacattcgcacagtggtcaacaca
acaaaaggcatgagcgacttccatctcatccgaaggcgtttcttcgtcaatcttggtctc
attcctctcattactgccttccatgttagctctctgctccttctcaatcaagggagtttg
tcaaatagtgttacctcaattagttttcaaatcatatctgtgataattgccgtgtttgtg
gcttatggcttcgtgtattacgagtcccaagcgaacaccaaacattccagccgaacctca
cctgcttccaaatcaagtggggcagtgaaatcggctttgatctacactcaaccccaccat
cacccggtctcagaggtgtctgctatggacaatctcagtcgaaatatttccgtggcctca
accacgtcctattctacgacatcccagaagaaatcggggacgaaagacatttataattgt
tactacaccgactcagaatcggacttggataggagaagcattcagctcgcctccagtcat
tcaagcgatgaagacaacccaatcccaccaagcaatgggcatcatagaacctatgagaat
cgcctcgtggtaaatgacaaacccaatcatagttaa
DBGET
integrated database retrieval system
