Thermococcus chitonophagus: CHITON_0008
Help
Entry
CHITON_0008 CDS
T04536
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
tch
Thermococcus chitonophagus
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tch03000
]
CHITON_0008
Transcription factors [BR:
tch03000
]
Prokaryotic type
Helix-turn-helix
Other families
CHITON_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_IclR
MarR_2
Rrf2
HTH_Crp_2
DUF5817_CT
MarR
HTH_5
GntR
DUF7342
HTH_36
HTH_24
Regulator_TrmB
HTH_Cmi2_C
HTH_23
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
CUX76787
UniProt:
A0A160VPT3
LinkDB
All DBs
Position
I:complement(5056..5838)
Genome browser
AA seq
260 aa
AA seq
DB search
MEDIIAKLIRLGLKEYEARVYATLVIIGPAKASDIAKESGVPRPRVYDVLKELHRKGFVE
ISEGSPTYFRAVDPEKVIATLRDEYIRSAEEVIIMLKSYQRERQEEWLPVWYLQGEWSVK
NRVEELASRAEREFVAAFMDLKLALKFRKAFENAKSRGITPIILFITKTRCYESHLNELG
KVYFIPLSKILEGEPRDFMEAVARALFSTKERYIVKGLFIRDSQESILVYEEGGLKGLMV
KISFIPVIQREVIEYYLRKT
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggaggacataattgcgaagttgattaggcttgggcttaaggagtatgaagcgagagtt
tatgcgactttagtaatcatcgggccagcaaaggcgagcgacattgcgaaggagagcgga
gttccgaggcctagggtctatgacgtccttaaggagttgcacagaaagggattcgttgaa
attagcgagggaagtccaacgtattttagggcagttgatcccgagaaagttatagcaaca
ctaagggatgaatacattcgatcggcggaagaggtcataataatgctcaagagttaccag
agggagagacaagaggaatggttgccggtatggtaccttcagggagaatggagcgttaaa
aatcgtgttgaggagcttgcaagtagggctgagagggagttcgtggcggcgtttatggat
ctaaagctggctttgaagtttaggaaggcctttgaaaatgcaaaaagcagagggataacc
ccgattattctgttcatcactaagactaggtgttatgaaagtcatctaaatgagctgggg
aaggtgtacttcatccctctatcgaagatcctcgaaggtgaacccagggactttatggaa
gccgttgcaagggctttgttctccacaaaggagaggtacatagtaaagggtctgtttatt
agggattcccaagagtcgattcttgtttatgaggagggaggcttgaaaggcctcatggtg
aagatatcctttattccagtgattcagagggaagtaatagaatactacctgaggaaaact
tag
DBGET
integrated database retrieval system
