Thermococcus chitonophagus: CHITON_0206
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Entry
CHITON_0206 CDS
T04536
Name
(GenBank) Dna2 helicase involved in Okazaki fragment processing
Organism
tch
Thermococcus chitonophagus
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
DEAD
UvrD_C_2
NAT10_TcmA_helicase
PDDEXK_1
Zot
PhoH
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
CUX76985
UniProt:
A0A160VQ91
LinkDB
All DBs
Position
I:complement(173533..177492)
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AA seq
1319 aa
AA seq
DB search
MIELHPSEIARFFELDHCPRFMIFLQKRKKGELREYEGIIRKKETEDRELAKWGEEFELQ
ILGALKGEFEAIYGFFRKGEDTVTKKWFEKHNPGGIIEFESEYDAVKTLLKILGSHENVL
VYQAPLTGEIGKFKIKGRADFIAKRGRKYYLLETKFTKEEKLPHRVQAVIYSMLLSKLID
GEINLSVVTRDNAPWPANFLKFPDDVLEFVFTIEDTLSRDFREVEPWITVRCTTCQFEAL
CLSQALSTGDLGLLGVAPGEKRVLVENGVRDIQDLANLFSFPSNSPVDFREPEVRNRDAV
KEIARRTGLNIVRLSRIAQAVLMERGGRVERLYIPGSGYNLPKERGEYYKDLVKVFIYVQ
KSPITETLIGISALVKGPRGIKGLKEERIISEIVEEAPIEVQTGLEEEAKMLERFFKDLI
NTIKDLSPSEDIYLHLYFYTRGQRESLVDALRRHYNLWWSKPIRAILSLRRAIDWEGFSI
LTDELIERHALPFAQGLGIIPVSIQFGYRWRSNRLFEDIFKVLAWKSNGRLFLGKLESVT
RHNPLEEPLYPVINRDDAELPFTPFWKALVEMSNSNSEEIALGLHDILGQVVEAMATIEK
GIDERYKDGFVKKEPIKRDELENFDMEDGSLAKVLMEYLLLEFHSRRGMLEKYYRLPLDV
RAYSEKTAIVKVTKVEKGRECRIWGQLVIPGENGFARYSPDEVLVDIDEDSWVVVTPLDS
LGEDDPARIIRRMPLGIVEAIDHKHGGIVIKLISLRRMKFTFPHFGYKCMNGEVVINGVK
VRAGNYLVLDPAIDDIGMSRAFEILENIDNHVIYDLLRNLYEDNPEVDVTVDLWDESSVE
EFLASIEHLNEEQRAFASDVRHRLVTLQGPPGTGKTSGALAPAILARAYATLKKGRSALF
LVTGLSHRAVNEVLLRTYRLIQDMKGKFPLLDRVRLLRGVSGEEAIEVIRKDLGVEVDYV
FKEIKFSSGQMSLFGGGKVEILFATPQTAHRLLKNVKGVDLVVVDEASMMDLPMFLLATS
KARGQVLLVGDHRQMQPIQVHEWELEDRKTIERHFPFLSALNFVRFLRGELDGRELKRFR
RILGRDPPKLNGKKDELLPMYRLKETYRLPQTLARLHTELFYSFDGIELRSAKKPKKEVL
DALRRAGKDEFLGFVLDPDYPVVLIVHEEGESTKVNELEASLVERIVNALENVGVGVVVP
YRAQKRLIRSRIDVQVDTVERFQGGEKDVIIVSMTSSDPAYLSKVMDFLYDPNRLNVAAS
RAKEKLIMIASRNIFTLTPRDLDTFELVRPWKRFYVRMREGERFEWKVGDVRVEAYRMK
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgatagagcttcatccaagcgagatagctaggttcttcgagcttgatcactgccccagg
ttcatgatattccttcaaaagaggaaaaaaggcgagctaagggaatacgagggaattatt
aggaagaaagagactgaagatagggagctggctaagtggggtgaggagttcgagctccag
atattgggggctcttaagggtgagtttgaggcaatttatggcttctttaggaaaggggag
gatacagtaacgaagaagtggtttgaaaaacacaaccctgggggtataattgaatttgag
agcgaatatgacgctgttaagactctcttaaaaatcctggggtcgcatgaaaacgttcta
gtttatcaggcccccttgactggagagatagggaagttcaaaataaaggggagggccgac
tttatcgctaagcgtgggagaaagtattacctccttgaaacgaagttcaccaaggaggaa
aagctacctcacagggttcaagccgtcatatattcaatgctcctctcaaagcttattgat
ggagagataaacctctcggtagttacaagggataatgctccatggcctgccaactttctc
aagttccctgatgacgtccttgagttcgtgttcacgatcgaggatacgctatcgagggac
ttcagggaagttgagccgtggataaccgttagatgcaccacatgccagtttgaagccctc
tgcctttctcaagctttaagcaccggggatcttgggctactgggcgtggccccaggggag
aagagagtgctcgttgagaacggtgttagggacattcaggacttagctaacctcttctcc
ttcccctcaaacagtcccgtcgattttagggagcccgaggtgaggaacagggatgcagtt
aaggagatagcgaggaggacgggccttaacatcgtcaggctctcaaggatagctcaggct
gttctcatggagaggggcggaagggttgaaagactgtatatcccaggctcgggctacaac
cttcccaaagagaggggagagtactacaaagacctggttaaggtcttcatatacgtccag
aaaagtcctataactgaaactctcattggaatttcggcccttgttaagggtcctagaggg
attaagggtcttaaagaggagaggataatatctgagatcgtggaggaggcacctattgag
gttcagacaggtctcgaagaggaagcaaagatgctggaaaggttcttcaaggatttaata
aacacaataaaggatctttctcccagcgaggatatatacctacacctctacttctacacg
aggggtcagagggagagcctagttgatgcactcaggaggcattacaatctctggtggagc
aagcccataagggcaatcctgagcttgaggagggccatagactgggagggcttttctatt
ctaacagatgagctcatagagaggcatgccctccccttcgcccagggcctcggaataatt
ccggtatcaatacagttcggctacagatggaggagtaacaggctctttgaggacattttt
aaggtattggcgtggaagagcaatgggaggctcttcctgggaaagctggagagcgttacc
cgacataacccgctcgaggagcccctctatcccgtgataaatagggatgatgctgagctt
ccattcacgccgttctggaaggccctcgttgagatgagcaattccaatagcgaggagata
gccttgggccttcacgacatcctggggcaggtagttgaggccatggcaacgatagagaag
gggatagatgagaggtacaaggatggattcgtgaagaaggaacccattaagagggacgag
ctggagaacttcgacatggaggatggctctttggccaaggttctaatggagtacctcctc
cttgaattccactcgagaaggggaatgctcgaaaagtactacaggcttcccctcgacgtt
agagcttactcggagaagacggccatagtcaaggtgactaaggtagagaagggcagagag
tgcaggatatggggccagctcgtaattcccggagagaatggatttgccaggtactcacct
gatgaagttttggtcgatatagatgaagattcatgggtggttgtaactccccttgacagc
ttgggagaggatgatccggccagaataataaggaggatgcccctgggaatagttgaggca
atagaccacaagcatggaggcattgttataaagctcatctcacttcggaggatgaagttt
accttcccccactttggctataagtgcatgaacggtgaggttgtaatcaacggcgtgaag
gtcagggccggtaactatctggtcttagatccagcaatcgatgacataggcatgtctagg
gcctttgagatcctcgaaaacatagataaccacgtgatctacgatctgctcaggaaccta
tacgaggacaaccctgaagtcgacgttaccgttgatctgtgggatgaaagctccgttgag
gagttcttggcaagcattgagcatttaaacgaagagcagagggccttcgcttcggacgtg
aggcataggctggtaaccctccagggtcccccaggaaccgggaaaacttccggagccttg
gcccccgccatactcgctagggcctacgccacactcaagaagggaagaagtgccctcttc
cttgttaccggcctctctcacagagccgtgaacgaggttctcctgaggacttacaggctg
atccaggatatgaagggtaagtttcccctactggatagagttcggctgctcagaggagtt
tctggtgaggaagcgatcgaggtcataaggaaggatctcggcgtggaagttgattacgtg
ttcaaggagatcaagttttcgtcaggtcaaatgagcctcttcggtggtgggaaggtcgag
atactcttcgcaacccctcaaacggcccacagattgctcaagaacgttaagggtgttgat
ttggttgtagtggacgaggccagcatgatggatcttcccatgttcctccttgccacttct
aaagccagaggtcaagtcctcctagttggagaccacaggcagatgcagccaatacaggtt
catgagtgggagctcgaggacaggaagaccatagagaggcacttcccattcctctcggcc
ttaaacttcgtgaggttcctcaggggagagttagatgggagggagcttaagagattcagg
agaattctaggcagggatccgccaaagctgaacgggaagaaggatgagctactgccgatg
tacaggcttaaggaaacttataggctacctcagaccctagctaggttgcacaccgagctc
ttctactccttcgatgggatagagctcaggagtgcaaagaagcccaagaaagaggtttta
gatgctttgaggagggccggaaaggatgagttcctgggcttcgtgcttgatcctgactac
ccggtggtgttgattgtccacgaagagggagaatctacgaaggtcaacgagctcgaggcc
tctctagtcgagagaatagtcaatgccttagagaatgttggtgttggggtcgtcgttccc
tacagggcccagaagaggctgataaggtctaggattgacgtgcaggttgatacggttgag
aggttccagggcggggagaaggatgttataatagtctcaatgacctcgagcgatccggct
tacctctcgaaggtcatggactttctctacgatccaaacaggctcaacgttgccgcgagc
agggctaaagaaaagctgataatgatagcctcacggaacatcttcaccctgacccccagg
gatcttgacaccttcgagcttgtcaggccgtggaagaggttctacgtgaggatgagagaa
ggggaaaggttcgaatggaaggttggagatgtaagagttgaggcctatcggatgaagtag
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