Thermococcus chitonophagus: CHITON_0296
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Entry
CHITON_0296 CDS
T04536
Name
(GenBank) hypothetical protein
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
tch
Thermococcus chitonophagus
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tch03009
]
CHITON_0296
Ribosome biogenesis [BR:
tch03009
]
Prokaryotic type
rRNA processing factors
CHITON_0296
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF402
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
CUX77075
UniProt:
A0A160VQG7
LinkDB
All DBs
Position
I:complement(259957..261366)
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AA seq
469 aa
AA seq
DB search
MSTESEIAVRIRGIYSTALTKLFLDRGFKIVQPSDVIAERLGIEKSYEDFDVDIYDKNHG
ITIVGTKVEEVKKVLEEEFIDVFFRKLPYKLYGIYKGIVVKRDDRYVYVDIGNAIGTVLI
EELPDATEGDEVVVQVKKHNVLPHLSVLITIPGDYAVLIPKPIGVQRHVKISRKIKDPEE
RERLRILGLSVDLGEWGVLWRTAAAYKDWNTLRDELVRLSKIADRLKEADKYSAPAEIIE
GREIYDVEFGGGTKKKLDEIRHKVVPTIEGHHQFKSYDPEFTLAVEVAEGILAKMPSQRQ
KVSEGFIEAVVMNKGPKVGWLFTLNHVKPDGQVIKIGPGEIIEVSTNPLKVKMKRFLRPG
KFYDGLEIPIEHGDYAITEIEAGKWWFVHRYYDKEGNLKGEFYNINTPVEIYPDKARYID
LEVDIVRWPDGKKEIIDKDKLKEHYDDGIISERLYKAVLKITQEVFDRI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacagagtcagagatagcggtgaggattaggggaatttatagcacggccctaaca
aagctgttccttgacagggggtttaagatagtccagccgagcgatgttattgccgaaagg
ctcggcatcgaaaagagctatgaggactttgacgtggacatatacgacaagaaccacggg
attacaatcgtcggaacgaaggttgaggaagttaagaaggttttagaggaagagttcatc
gacgtattcttcaggaagctcccctacaagctctacggaatatacaagggaatagttgta
aagagggacgataggtacgtttacgtcgacataggaaatgccataggaactgttctgata
gaagagctaccggatgccacggaaggagacgaagttgtggttcaggtcaagaagcacaat
gttctcccccacctcagcgttctcataacgattcctggggactacgcggtgttgattcca
aagcctataggagttcagaggcacgtaaagatctcgagaaaaataaaggatcctgaggaa
agggagaggcttaggatactcggtctgagcgttgatctcggtgagtggggagttctctgg
agaacggcggcagcctacaaggactggaacaccttaagagatgagctcgtaaggctgtca
aagatagccgacaggcttaaggaagcagacaagtactctgcgccggccgagatcatagag
ggaagggagatctatgatgtggagttcgggggaggaacgaagaagaagctcgatgagata
aggcacaaggtagttccaaccatcgaggggcaccaccagttcaagtcttacgatcccgag
ttcaccttagccgttgaggttgccgaggggatacttgcaaagatgccttctcaaaggcag
aaggttagcgagggcttcatagaggccgttgtcatgaataagggaccaaaagttggctgg
ctcttcacgctgaatcacgttaagccggatggccaggtgataaagataggcccaggagag
ataatagaggtttcaacgaacccgcttaaggtgaagatgaagaggttcctcaggcccgga
aagttctatgatggccttgagataccgatagaacatggagactatgcaataactgagata
gaggctggaaagtggtggtttgtgcacaggtactatgataaggagggcaatttgaaggga
gaattctataacataaacactccagttgagatttatccggacaaggcaaggtacattgac
cttgaagttgacatcgtcaggtggcccgatggaaagaaggagataatcgacaaagacaag
cttaaagagcactacgatgacgggataataagcgagaggctatacaaggccgttctgaag
ataacccaggaagtcttcgacaggatctga
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