KEGG   Thermococcus chitonophagus: CHITON_0310
Entry
CHITON_0310       CDS       T04536                                 
Name
(GenBank) Replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
tch  Thermococcus chitonophagus
Pathway
tch03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHITON_0310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tch03032]
    CHITON_0310
DNA replication proteins [BR:tch03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     CHITON_0310
SSDB
Motif
Pfam: AAA Rad17 RCF1-5-like_lid AAA_14 AAA_22 AAA_5 nSTAND3 RuvB_N AAA_16 AAA_11 DUF815 AAA_17 Zeta_toxin AAA_28 AAA_30 AAA_33 ResIII AAA_6 AAA_24 AAA_assoc_2 AAA_19 AAA_25 AAA_7 NPHP3_N T2SSE ABC_tran PPV_E1_C AAA_18 Merozoite_SPAM Viral_helicase1 ATPase TsaE SRP54 AAA_29 RNA_helicase Ploopntkinase3 DUF6040 Hydin_ADK
Other DBs
NCBI-ProteinID: CUX77089
UniProt: A0A160VR89
LinkDB
Position
I:complement(270371..271810)
AA seq 479 aa
MPELPWVEKYRPRRLSEIVNQEDAIEKVKSWIEKWLHGNPPKKKALLLAGPPGSGKTTTV
YALANEYNFEVIELNASDERTYEKIARYVQAAYTMDILGKRRKLIFLDEADNIEPSGAKE
IAKLIDRARNPIIMAANKYWEVPKEIRDKAELVEYRRLSVRDVMNALIRILKREGITVPK
DILYEIAKRSSGDLRAAINDLQTVVVGGYEDAKQVLAYRDVEKTVFQALGLVFGSDNAKR
AKMATWNLDMTPDEFLLWVDENIPHMYLKPEEMAKAYEAISRADIYLGRAQRTGNYSLWK
YAIDMMTAGVAVAGTKKRGFAKFYPPNTLKMLAESKEERSLRDSIIKKIMREMHMSKLEA
IETMKIIRTIFENNLDLAAHFTVFLGLSEKEVEFLAGKENAGTIWGKALALRRKLKLTKR
EEEKVEEKVEEEIEEEVEEEVEEEAEEEIKEEEEKKEEEKPKEKRKGKQATLFDFLGKK
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgccagagcttccctgggttgagaagtacaggccgagaaggctgagcgagatagttaat
caggaggatgcgattgagaaagtaaagtcgtggatagagaagtggctccacggtaatccg
ccgaagaaaaaggccctactgctggcaggacccccaggaagcggcaaaactactacggta
tatgcgctggcgaatgaatacaacttcgaggtaatcgagctgaacgcgagcgatgagagg
acttacgagaagatagcgaggtacgtgcaggcagcatacacgatggacatcctggggaag
aggaggaagctgatatttcttgacgaggcggacaacatagagcccagcggagcaaaggaa
attgcaaagctgatagacagggcaaggaacccgataataatggcggcgaacaagtactgg
gaggttccaaaggagataagggacaaggcggagctagtggagtacaggaggctcagcgtt
agggacgtaatgaacgcccttataaggatcctaaagagggaagggattaccgtaccaaag
gacatcctgtacgagatagccaagagatcaagtggtgatttaagagctgcgataaacgac
ctgcaaacagtcgtggttggaggctacgaggatgcaaagcaggttttagcgtacagagat
gtagagaagacggtgttccaggcgttgggtttggtgtttgggagcgacaacgcgaagagg
gcgaagatggccacgtggaatttggacatgacgccagatgagttcctgctgtgggtagat
gagaacatcccccacatgtacctaaagccggaggagatggccaaagcttacgaggccata
agcagggccgacatttatctaggcagggcccaaagaacggggaactattcactgtggaag
tacgctatagacatgatgaccgctggagttgcagtggcaggaacgaaaaagagaggcttc
gccaagttctacccaccaaacaccctaaagatgctggctgaaagcaaggaggaaagatcg
cttagagattcaattataaagaagataatgagagagatgcacatgagcaaacttgaagcc
atagagaccatgaagatcatcaggacgatcttcgagaacaatctagatttagcggcacac
ttcacggtattcttgggattgagcgagaaggaggttgagttcctagcggggaaggagaac
gcggggacaatatgggggaaggccttagcattgaggaggaagctcaagctcaccaagagg
gaagaggagaaagtggaagaaaaggtggaagaggaaatagaggaagaagttgaggaagaa
gttgaagaagaggccgaagaagaaataaaggaggaagaagagaagaaagaagaagagaag
cccaaggagaagaggaaagggaagcaggccacgctcttcgacttcctggggaagaagtag

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