KEGG   Thermococcus chitonophagus: CHITON_0311
Entry
CHITON_0311       CDS       T04536                                 
Name
(GenBank) Replication factor C small subunit @ intein-containing
  KO
K04801  replication factor C small subunit
Organism
tch  Thermococcus chitonophagus
Pathway
tch03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHITON_0311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tch03032]
    CHITON_0311
DNA replication proteins [BR:tch03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     CHITON_0311
SSDB
Motif
Pfam: Rep_fac_C AAA Intein_splicing DNA_pol3_delta2 LAGLIDADG_3 RuvB_N Hom_end Rad17 AAA_16 AAA_18 Mg_chelatase AAA_assoc_2 AAA_22 ResIII nSTAND3 AAA_25 DNA_pol3_delta AAA_5 TIP49 AAA_7 AAA_28 AAA_11 TPR_7 bpMoxR
Other DBs
NCBI-ProteinID: CUX77090
UniProt: A0A160VQU6
LinkDB
Position
I:complement(271817..274108)
AA seq 763 aa
MAEEVREVKVLEKPWVEKYRPQKLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGTGKT
TSALALARELFGENWRHNFLELNASVSKDTPILVRINGRILRTTFAELDKMYFDDDDGEV
SYKDVDNLEVLTVDENYRVRWAKVSKVIRHRVPAILRVHLEGGGKLELTGNHSVIVLTEN
GLETIKASELKEGSILLSFTTNLEGFLDILDLTGYSVRETPRTRVFSELSVDEEISYMLG
LYAAEGAIGFKGETSGQVIYTLGAHEKELIDRVRNFAERLGISVYENYISSGFDRSRKTA
YQVRLLNTQLAKFFEQSFYDGEGRRAENKRVPGFIFEFPVHERIAFLRGLADGDGSGEWE
SVIRISSVSRDMLIDVVWLARISGIEASIFEREARLIWKGGMKWAKAELLPAEPIVKMLK
KIEHAIEGNWRYELRHQLYERKKRVRKETLRKIIDMINEDKLNEGERGILETLKKLAYTD
LHALMVKKIELVEYNDFVYDVSVPGNEMFFAGEIPVLLHNSDERGINVIREKVKEFARTK
PIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIF
RFRPLRDEDIAKRLRFIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITD
ENVFMVASRARPEDIREMMLLALEGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLP
ISEPKKVQLADKIGEYNFRLVEGANEMIQLEALLAQFTLIGKK
NT seq 2292 nt   +upstreamnt  +downstreamnt
atggccgaagaggtcagggaagtaaaagttcttgaaaagccttgggttgaaaagtacagg
cctcaaaagcttgatgacatcgttgggcaggagcatatcgttaaaaggctaaaacactat
gttaaaacgggctcaatgccgcatctactcttcgctgggcctcctggcacgggaaaaacg
accagtgcgctagctttagcccgagaactcttcggagaaaactggagacacaatttcctt
gaattaaatgcctcagtttcaaaagacacccccatactggttaggataaacggcaggatt
ttgaggacaacatttgcggaacttgataagatgtactttgacgatgacgatggagaagtg
tcgtacaaggacgttgataaccttgaagtgttgaccgtcgatgaaaactatcgcgtcaga
tgggccaaggtcagcaaggtaatccgccaccgcgttccagcaattctcagagtgcacttg
gagggaggaggaaagcttgaactaactggaaatcactcagttatcgttctcactgagaat
ggcctcgaaacaataaaggcgagcgagcttaaagagggctcaatactgctaagcttcacg
acaaacctcgagggcttcttggatatcctcgaccttaccgggtacagcgtgagggaaacg
ccaaggacaagggtattcagtgagctatcggttgatgaagaaatctcctacatgctgggt
ctctacgcggctgaaggtgccatcggattcaaaggagaaacctcgggccaagttatttac
accctcggagcccacgaaaaagaactaatagacagagtgaggaacttcgcagaaaggcta
ggaatcagcgtctacgagaactacatctcctcagggtttgatagatcaaggaaaactgcc
taccaagttaggctcctaaacacgcaactggcgaagttctttgaacagagcttctacgac
ggagaaggaaggagggcagaaaataagagagttcctgggttcatattcgagttcccagtt
catgagagaatagcattcctgagagggctcgcagatggcgatggaagtggagagtgggag
agtgtaatcagaatatcttcagtttcaagggacatgctaatagacgtcgtgtggctcgcg
aggatttctggaatagaagcaagcatattcgagcgtgaggccaggctgatatggaaggga
ggcatgaagtgggcaaaggcagagttgctcccagcggagccgatagttaagatgctcaag
aaaatagaacatgcgatagagggcaactggcgctacgagcttaggcatcagctctatgag
cggaagaagagagtcaggaaggaaacactaagaaaaatcatagacatgataaacgaggac
aaactgaacgagggcgagaggggaattctcgaaaccctgaagaagcttgcctacacagat
ctacacgccctaatggtgaagaagattgaactagttgagtacaacgacttcgtttacgat
gttagcgtcccaggaaacgagatgttctttgcaggcgaaataccggttctccttcacaac
tcagacgagagaggcataaacgtcattagggagaaggtgaaggagtttgcaaggacaaag
cccataggaggagcgagtttcaagataatattccttgatgaggcagatgccctgacccaa
gacgcccagcaggccttaaggagaacaatggagatgttttcgagcaacgttcgctttatc
ttatcctgtaattatagcagcaagataatcgagcccatccagtcaagatgtgctatattc
aggttcagaccattgcgcgatgaggatatagcaaaaagattaaggtttatagccgaaaac
gaaggattagagctgaccgaggaaggcctgcaggcgatcctctacatcgctgaaggcgac
atgagaagggcgataaatatcctgcaggcggcagcagccttggacaagaagataacagat
gagaacgtattcatggtggccagcagggccagaccggaagacatcagggagatgatgctc
ctagcactagaaggcaacttcctcaaggctagggagaagctgagggagatcctcctgaag
caggggctgagcggagaagacgttctagttcagatgcacaaggaagtcttcaacctgccg
ataagtgagccgaagaaggtccaattagctgacaagataggcgagtacaacttccgcttg
gttgagggagcaaatgaaatgattcagctcgaggccctgcttgcccagttcaccctaata
ggcaagaagtga

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