Thermococcus chitonophagus: CHITON_0470
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Entry
CHITON_0470 CDS
T04536
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
tch
Thermococcus chitonophagus
Pathway
tch03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHITON_0470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tch03021
]
CHITON_0470
Enzymes [BR:
tch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHITON_0470
Transcription machinery [BR:
tch03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CHITON_0470
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
CvfB_2nd
RNA_pol_Rbc25
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
CUX77249
UniProt:
A0A160VRM3
LinkDB
All DBs
Position
I:complement(425083..425649)
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AA seq
188 aa
AA seq
DB search
MYKIVTVKDVVRIPPRMFTMDPKEAAMIVLRDTYEGKYDRDEGVILSIVEVKEVGDGIIV
PGDGATYHEVVFDVLVWEPRLHEVVEGTVVDVVPFGAFIRIGPMDGLVHISQLMDDYVVY
DERNKQFVGKEKKYLLKLGDEVRARIIAVSPKSRIIRENRIGLTMRQPGLGKFEWIEKEK
RKEKEGKK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagatagttacggttaaggacgttgttagaattcctcccaggatgtttacaatg
gatccaaaggaggcagctatgattgttcttagggacacctacgagggtaagtatgacagg
gatgaaggagtcatactttcaatagtagaagtaaaggaagttggtgatgggataatagtt
cccggagacggggcaacgtatcacgaggtagtttttgacgttctcgtttgggaaccaaga
cttcatgaggtcgttgagggaaccgtcgttgatgtagttcccttcggagcgttcataagg
ataggaccaatggatggcctagtccacataagccagctcatggatgattacgtggtttac
gatgaaagaaacaaacaattcgtaggaaaagagaagaagtaccttctcaagctcggagat
gaagttagagcaagaataatcgccgtcagtccaaagagcagaataattagagagaacaga
ataggcttaacgatgagacaacctgggctaggaaagttcgagtggatagaaaaggaaaag
agaaaagagaaggagggtaagaagtga
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