Thermococcus chitonophagus: CHITON_0472
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Entry
CHITON_0472 CDS
T04536
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tch
Thermococcus chitonophagus
Pathway
tch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHITON_0472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tch03400
]
CHITON_0472
Enzymes [BR:
tch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CHITON_0472
DNA repair and recombination proteins [BR:
tch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CHITON_0472
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Amidohydro_1
GHL6
Motif
Other DBs
NCBI-ProteinID:
CUX77251
UniProt:
A0A160VUB8
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Position
I:complement(426291..427136)
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AA seq
281 aa
AA seq
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MFKIDRLRFGTAGIPLSTPKPSTITGIEQVRQLGLDAMELEFVRGINIKPELAKKIKHVA
KKLDVVLTAHAPYYINLNAKEKGKVEASKRRIIQSAERLYEAGGWSLVFHAGYYLKQPSE
QVYKNIRSALEDIVEELKSRGIKVWIRPELTGKPTQFGDLRELIKLSQEVDMVLPAIDFA
HAHARNRGRCNSEEEWREMLTLIENELGREALKNMHIHISGIEYGEKGEKRHINLQESDL
KWEDLLRILKEFNVKGVVISESPNIEGDAILMKKKWEELKV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaatcgacagattgaggttcggaaccgctggaatacccctttcgaccccaaaa
ccctcaacgataactggaattgagcaggtaagacagttaggacttgatgccatggagctt
gaattcgtgaggggtataaacataaagccggagttagctaaaaagattaagcatgtcgcc
aagaaacttgatgtagttttaactgctcacgctccttactacataaatcttaacgctaag
gaaaaaggaaaagttgaggcgagcaaaagaaggataattcaaagtgccgaaagactttat
gaagccgggggttggagtttagtttttcacgctggttattatctaaagcaaccttcggaa
caggtttacaagaatataagatctgcattagaggatatagttgaggagttgaaatctaga
ggaataaaggtctggataaggccagaactgacaggtaagcccacgcaatttggagatctt
agagaactgataaagttgagccaagaagtcgacatggttctaccagcaatagattttgcc
cacgcccatgctagaaatagaggaagatgcaattctgaggaagaatggagggagatgcta
actttaatagagaacgagctcggaagggaggctttgaagaacatgcatattcacataagc
ggaattgaatatggggagaagggcgagaagaggcacattaacttgcaggagagtgatctt
aagtgggaggatctcctgaggattctgaaggagttcaacgttaaaggagtggtaattagt
gaaagtccgaacatcgagggtgacgcaattttaatgaagaagaagtgggaggagctaaaa
gtttaa
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