Thermococcus chitonophagus: CHITON_0483
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Entry
CHITON_0483 CDS
T04536
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tch
Thermococcus chitonophagus
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tch03016
]
CHITON_0483
Enzymes [BR:
tch01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CHITON_0483
Transfer RNA biogenesis [BR:
tch03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
CHITON_0483
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
CUX77262
UniProt:
A0A160VR41
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All DBs
Position
I:complement(438737..439249)
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AA seq
170 aa
AA seq
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MKKVIEFFLSGDRAYSEREKAINQLYHNRGYGELKGNKLFLSLIEAAYLTERGWIKVLDG
SRELSFQDLVELGRRKDEDFDIKYLVYKDLRDRGYIVKSALKFGSHFRVYRKNAEHSDWL
IWVVRENQKLSPNDITARARVAHGVRKSMVMAIVDEDNDVVYYKVEWTKF
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtcatagagttcttcctgagcggggacagagcttacagtgagagagaaaag
gccatcaatcagctttaccataacaggggatatggagagctcaagggaaataagcttttt
ctttccttaattgaggcagcctacctaacggagaggggctggataaaggttctcgatgga
agtagagagttgagcttccaagatctagttgagcttggaaggagaaaagatgaagatttt
gacattaagtatctcgtctacaaggaccttagggacaggggatacatagttaaatccgca
ttaaagtttggctcccacttcagggtttataggaagaatgcggagcattctgattggctt
atatgggttgtgagagagaatcagaagctttctcctaacgatatcaccgcaagggctaga
gtggctcacggagtaaggaagagcatggtcatggcaatagttgatgaggacaatgatgtc
gtttattacaaagttgagtggacgaagttttga
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