Thermococcus chitonophagus: CHITON_0586
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Entry
CHITON_0586 CDS
T04536
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tch
Thermococcus chitonophagus
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tch03400
]
CHITON_0586
DNA repair and recombination proteins [BR:
tch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CHITON_0586
Archaeal homologous recombinant proteins
CHITON_0586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
Rad50_zn_hook
SMC_N
AAA_21
ABC_tran
AAA_29
NPV_P10
AAA_13
ABC_ATPase
Syntaxin
SbcC_Walker_B
HMBD
HetR_C
Baculo_PEP_C
DUF7310
Mad3_BUB1_I
GAS
RsgA_GTPase
BLOC1_2
DUF6011
DUF7575
Laminin_II
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CUX77365
UniProt:
A0A160VR47
LinkDB
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Position
I:complement(552205..554841)
Genome browser
AA seq
878 aa
AA seq
DB search
MKIERVKVQNFRSHRETEVVFKDGINLIIGQNGSGKSSLLDAILVGLYWPKASKKGLQKK
DFTRVGTRGAKIEIFFEHDGVKYWLLRDMARNVAYLKRLENGEWRHVTEPSMESVANFME
RLIPLEIFRNAIYVRQGEIEAILESDETRDKVVKRILNLDKIEMAYENIRGLIKYIKRKI
QDREAFIERTKTIDSSIDSLEKSLIEVLKDIKEIESKLPELEKEARGLGEREKELDALKE
EIVRSELKLEKLNSKRRGLEEKIKALEKKIEERNKRIKELEEATKALKELEEKERRFQEL
KEFRERYIREKSQGEKELERIRGQVENIEGRLKEISEKEKETKKLREELKRLEQAKDGLE
KAVKEYEEARSKLLQLKRLKVKLKGIDPRGIPAKIEELEKKRERITEEISELKSKKGELL
QRRKDREKAIEELKKAKGKCPVCGRELTEEHRRELLQQYSLEIKEIREDFLNISKKEEEL
SRELERIEKELKELRGLKSIAEDLIALEESLKEVNLEELEEKRKEYEEIKQRISSIRGKL
SELERELRLKEAFERKLERLNSIKDEITSRLEALEENLKSLGFSTLEDLEREIKELEKFH
AEYIRARKAEEDLRRELGLLGRDKEELDIAFEELAEVEEEMEELEEKIKALKDKYDQEGH
RKVKEELQRKREAISAMKAELEQLRKREEEIKRSLEELKKQREEREKAEEEVKMLRSALK
RAESLRDKIKMYKTVVREEALRRIGEIASEIFAEFTEGKYSQVVVKAEENKVKLFIVYDG
KEMPLTFLSGGERIALGLAFRLAMSMYLIGKMNLLILDEPTPYLDEERRRRLVEIMERHL
RKISQVIIVSHDEELRDAADYVIKLSLENGVSVLTIMG
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagagagggttaaagttcaaaacttccgctcacacagagaaactgaggttgtc
ttcaaagatggaataaacctgataataggccaaaacggttctggaaaaagctccctcctc
gatgcaattctcgttgggttgtactggccaaaggccagcaagaaaggcctccagaagaag
gacttcacgagggtagggacaaggggggcgaagatagagatattcttcgagcacgatgga
gtaaagtactggctactaagggacatggcaagaaacgttgcctacctcaagaggcttgaa
aacggagagtggaggcatgttacagagcccagcatggaaagtgttgccaacttcatggag
aggctaattcccctcgagatattcaggaacgctatttacgttaggcagggtgagatagag
gctattctcgagagcgacgaaactagggacaaggtcgtcaagaggatcctaaatttagac
aagatagaaatggcgtatgaaaacatcagagggctgataaagtacatcaaaagaaaaata
caggatagagaggcattcatagagaggactaaaacgatagattcttccattgattcactc
gaaaagagcctcattgaagtcttgaaagatataaaggagatagaatctaaactgccggag
ctggagaaggaagcccgcgggcttggagagagggagaaagagcttgacgcactaaaagag
gagatcgtaaggagtgagctgaagctagaaaagctcaactcaaagagaagggggcttgag
gagaagataaaagcactagagaagaaaattgaagaaaggaacaagagaattaaggagctt
gaagaggcaacgaaagcactgaaagagcttgaagagaaggagaggaggtttcaagagctc
aaggagtttagggagaggtacataagggagaagtctcagggagagaaggagctcgagaga
attaggggacaggtagagaacattgagggaaggctaaaggagatcagtgagaaagaaaag
gaaaccaaaaagttaagggaagaactaaagaggcttgaacaggctaaagatgggcttgaa
aaggccgttaaggagtacgaagaggcaagatcaaagctacttcagctgaagcggcttaaa
gttaagctgaagggcatagacccaagggggataccagccaaaatagaggagctcgaaaag
aagagggaaagaataactgaagagatcagcgagcttaagtcgaaaaaaggagagctcctc
cagaggagaaaggacagggaaaaagccattgaagaactaaaaaaggcaaaaggaaagtgt
ccagtctgcgggagagagcttacggaagagcacagaagggagttactccagcagtactct
cttgaaataaaggagattagggaggatttcttgaacatttccaagaaggaggaagagctg
agcagggaacttgagcgtattgaaaaagagctaaaggagctcagaggattgaagagtatt
gccgaagatctgatagccctcgaagagagcctcaaggaagtaaatttagaggaacttgag
gagaagagaaaggagtacgaggagataaagcagaggataagtagcataagaggcaaactc
tcagagctcgagagagagctcagacttaaggaggcttttgagagaaagctagagaggttg
aatagtatcaaagacgaaataacttcaagattggaggctctagaggagaacctaaaatcc
ctagggttctcaaccttggaagaccttgaaagagagattaaggagctcgagaagttccat
gcagagtacatcagggcaaggaaagctgaagaggaccttaggagagaattgggcctacta
gggagggataaggaagaactcgatattgcattcgaagagcttgcggaagttgaagaggag
atggaggagctcgaggagaagataaaagccctcaaagacaaatacgaccaagagggacac
agaaaagttaaggaagagctccagagaaagagagaagctattagcgcaatgaaggcagag
cttgaacagctgaggaagagagaggaggaaataaagagatcccttgaggagctgaagaag
cagagggaagagagggagaaagctgaagaggaagttaagatgttaaggagcgccttaaag
cgtgcagagtccttaagggacaagataaagatgtataagacagtcgttagagaggaggcc
ctaaggaggataggggagattgcgagcgagatattcgccgaattcacagaaggaaaatac
tcacaggtagttgttaaggccgaggaaaataaggttaagctcttcattgtctacgatgga
aaggagatgcccctaacgtttctcagcggtggggagaggatagccctgggcctagccttc
aggctcgccatgtctatgtacctaattggaaagatgaacctcttaatcctcgacgagcca
accccctatcttgatgaggagaggagaaggaggctcgtagagataatggagaggcacctc
aggaagatatcccaggtcataatagtatcgcacgacgaagaactcagggatgcggccgac
tacgtcataaagctcagcttagagaacggtgtttccgtcctcaccatcatggggtga
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