Thermococcus chitonophagus: CHITON_0588
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Entry
CHITON_0588 CDS
T04536
Name
(GenBank) Bipolar DNA helicase HerA
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tch
Thermococcus chitonophagus
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tch03400
]
CHITON_0588
DNA repair and recombination proteins [BR:
tch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CHITON_0588
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Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
A_thal_3526
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
CUX77367
UniProt:
A0A160VR37
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Position
I:complement(556093..557742)
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AA seq
549 aa
AA seq
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MISEGDRIGIVKGEASFTTYEFSVDPKADISFGEFVVTKNRAGELVLGTVRNIKNVNWLL
SSAKSNFNSLLLDVEDYGESIHENEEVVATVRILGKVNGGELAPNRVPVKNGESVYKASD
DILKQLYEPNGASIEVGTLLLRENVPIKLDVNELVSRHFAVLAVTGAGKSNAVAVMVKGL
VEDIGGTVVVLDPHGDYVNLKLPETGSSLVNIIEGKIKVDELDSEELADLLEVRSTASIQ
REFLARAWETIQHENKELGGAVLLEELEKTLREWITKRMIKYWDEKKQRYVTEELKSDRI
ETIRGIIFRIRRFLRNYGAFVTSENLVAAIRPGMVNVIDLGPLDELQMKVIVGKFLQEVF
EARVEYEKARKNYMRTGEREYEKIMDEIRQKYPALAYPILIIVEEAHIFAPQGEENDAAR
IMGRIAREGRKFGVGLGVVSQRPSKLNEDILSQMNTKIILRIVNPRDQEYVLRASEQLSK
DLMDDIAGLGKGEAVIVGQAIKVPALVRIYNFKELKGKAGRGEYGGEDIGVVDRWAEMKS
EGIDYTVDF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgataagcgagggagacagaatagggatcgttaagggagaagcgagctttacaacgtac
gagttttccgtcgatcctaaggctgatatatcatttggtgagttcgtggttacaaagaac
agggctggagagttggttcttggcacggtcaggaacataaaaaacgttaattggcttctt
tcaagtgcgaaaagcaatttcaactccctcttgttggatgtagaggattatggggagagc
atccatgaaaatgaagaagttgttgccacggtgaggatcttaggtaaggtcaacggaggg
gagctcgccccaaacagggttccagttaaaaacggcgagagcgtttacaaggcctcagat
gatatactcaaacaactttacgagcccaatggagctagcattgaagtgggtacacttctc
ttaagggaaaacgtccctataaagcttgatgttaacgagctcgtttcaaggcactttgca
gttcttgcagtaacgggtgcaggtaaaagtaacgctgtagcagttatggtaaaaggacta
gtagaggacataggagggacagtggttgttctcgatcctcacggcgattacgtgaacttg
aagctgcccgagaccggaagttccctagtaaacatcatagagggaaagataaaggttgac
gagcttgactcggaggagctagcggacttactagaggtaagatcaacggcctcaattcag
agggaattcttggcgagagcctgggagacaatccagcacgagaacaaggagcttggtgga
gcagttcttcttgaagagctcgagaaaactctgagagagtggataactaaaaggatgatc
aaatactgggatgagaagaagcagagatacgttacggaggaactaaagagcgacaggata
gagacgataagaggaataatcttcaggattagaaggttcctgaggaactatggagctttc
gtgacgagcgagaatttagttgcagcaataaggcccgggatggtaaatgtaattgacctt
gggcccttggacgagctacagatgaaggttatagtcggaaaattccttcaggaagttttc
gaagctagagttgaatatgaaaaagcaaggaagaactacatgaggacaggagagagggag
tacgagaagataatggatgagataaggcagaagtatccggccttggcttacccaatactg
ataatagttgaggaggctcacatattcgcgcctcagggagaagaaaatgatgccgcaaga
atcatgggaaggatagcgagggaaggaaggaaatttggagtcggccttggggttgtttcc
cagagaccaagcaagctgaatgaagatatactcagccagatgaatacaaagataatcctc
agaatcgttaatccgagggatcaggagtacgtactaagggccagtgagcaactaagcaag
gacttaatggatgatatagcgggactagggaaaggagaggctgttattgttggacaggca
attaaggttcccgcgctcgttaggatatacaactttaaggaacttaaagggaaagccgga
aggggagagtacggtggggaggacattggagttgttgacagatgggctgaaatgaagagc
gaaggaatagactacacagttgacttttga
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