Thermococcus chitonophagus: CHITON_0689
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Entry
CHITON_0689 CDS
T04536
Name
(GenBank) DNA repair helicase Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tch
Thermococcus chitonophagus
Pathway
tch03022
Basal transcription factors
tch03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHITON_0689
09124 Replication and repair
03420 Nucleotide excision repair
CHITON_0689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tch03021
]
CHITON_0689
03036 Chromosome and associated proteins [BR:
tch03036
]
CHITON_0689
03400 DNA repair and recombination proteins [BR:
tch03400
]
CHITON_0689
Enzymes [BR:
tch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CHITON_0689
Transcription machinery [BR:
tch03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CHITON_0689
Chromosome and associated proteins [BR:
tch03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CHITON_0689
DNA repair and recombination proteins [BR:
tch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CHITON_0689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_30
Tautomerase_2
AAA_19
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
CUX77468
UniProt:
A0A161K9B5
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All DBs
Position
I:650441..652363
Genome browser
AA seq
640 aa
AA seq
DB search
MLEHFPYQSLRPHQEEFITLVREAVKSGKNLIVEAPTGFGKTISVLAGVLPYAISLGYKV
IYLARTHKQMDRVIEELKAIRKVGKVSGIEFRSRKDLCLHKYIQTFAPDAYTSMVVCKSL
RKLGKCKFYENLKEKKDRVKEIVEFFLERPSFPWEVLEYSELLELCPYEVTRKVGEKANV
IVASYLYMLNPWIRQAFMDSLGIDYSDLIVIFDEAHNVPDQAISTLSDRLSVRTIERAIK
EAHEYGEDDVENFLSIFLKGLEILYKKRLENYESSEIPIRPQEVFEHPILILSYSPRDLA
EIINYMVEIGDAIREDKIERNLPPRSYVGRVGEFLWNWLSVGEREDYIHLFSKERGLALE
LVALDPSVALDFVNEVHSAIFMSGTLSPLEAFRDIIGVKAELKKFPRMVKRENAIVLVAR
DVSTRGEERSPSLYRKIAEYIFEAVKIIPKNVGVFTASYEVLEGIISTNVHIKIEEEVGK
KVFIEKKDASSSENDAMVTEFKAHAKKNGAVLFGVMGGRNSEGQDYSGDEMNGVVLVGIP
YARPTPRVQAQIRYFEKKFPGKGRYYGYVLPAHRKLAQAAGRVHRSAEEKGSIVILDYRV
LWSNVKKDLPDWMVETMKPVTLPLMRIRLRKFWRSGEIGS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgctagagcacttcccataccagagccttcgaccgcatcaggaagagttcataacccta
gtcagggaagccgttaaaagtgggaaaaatctaatagtggaggctcccacgggattcggg
aaaacgataagtgttcttgctggagtattgccctatgcaatctccctggggtacaaggtg
atttatctggcaagaactcacaagcagatggacagggtaatagaggagcttaaggcaata
agaaaggttggaaaagttagcgggattgagttcaggagtagaaaggatctatgcctacac
aagtacattcagacgttcgctccggacgcttacacgagtatggtcgtatgtaagagcctt
agaaagcttggaaagtgcaagttctacgaaaatctaaaggagaagaaagatagggttaag
gagatagttgaattcttccttgagagaccatcttttccctgggaagttcttgaatactca
gaactgctggagctatgtccttatgaggtaactaggaaggttggggagaaggccaacgta
atagttgcaagctatctctatatgctgaacccatggatcaggcaggcctttatggacagt
cttggtattgattattctgatctgatagtgatatttgatgaggcccataacgttccagat
caagcaatctcaacgttaagcgacaggctaagcgtgaggacgattgagagagcaattaaa
gaggcccatgaatacggggaggatgacgttgaaaacttcctttcgatattcctaaagggg
ctggagatactgtacaagaagagattagagaattatgaatcctccgagattcctataagg
ccccaggaagtctttgaacatccaatcctcatactctcttactctcctagggatttggct
gagatcataaactacatggttgaaattggggatgcgataagagaggacaaaatagagagg
aacctcccaccaaggagctacgttggaagagtgggggaatttctatggaactggctctcc
gttggagagagggaggattacatccatttattcagcaaggaaaggggactcgctctagag
ctcgtagcccttgatccttcagtggccctagactttgttaacgaggttcactcggcaatc
ttcatgtcaggaacgctcagccccttggaggcatttagggatatcataggtgtaaaagcc
gagctaaagaagttccccaggatggtaaaaagggagaatgcaatagttttagttgcgagg
gatgtttccacgaggggagaagagaggagccctagcctgtacaggaagatcgccgagtac
atttttgaggccgtaaagataattcccaaaaacgtgggcgtttttacagcttcatacgaa
gtgctggaggggataataagcaccaatgttcacataaagatcgaggaggaagttggaaag
aaggtgttcatagaaaagaaggatgcaagctcaagtgaaaatgatgctatggttacagag
ttcaaggcacatgcaaagaaaaacggggcagttctctttggtgttatgggcggaaggaac
agcgagggtcaggactactcaggagatgaaatgaatggtgtagttctggtgggcatccct
tatgcccggccaactccgagggttcaagcccagataaggtactttgaaaagaagttccct
gggaagggaaggtactatggctacgttctacccgcccacaggaagctcgctcaagctgct
ggaagagttcatcgctctgctgaggaaaagggaagcatagttatccttgactatagggtt
ctgtggagtaacgttaaaaaggatcttcccgactggatggttgagactatgaagccggtg
actctgcctcttatgagaatcagacttaggaagttctggaggtctggtgagattggaagt
tga
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