KEGG   Thermococcus chitonophagus: CHITON_1662
Entry
CHITON_1662       CDS       T04536                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tch  Thermococcus chitonophagus
Pathway
tch03030  DNA replication
tch03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHITON_1662
   03410 Base excision repair
    CHITON_1662
   03450 Non-homologous end-joining
    CHITON_1662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tch03032]
    CHITON_1662
   03400 DNA repair and recombination proteins [BR:tch03400]
    CHITON_1662
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tch04147]
    CHITON_1662
DNA replication proteins [BR:tch03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CHITON_1662
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CHITON_1662
DNA repair and recombination proteins [BR:tch03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CHITON_1662
Exosome [BR:tch04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CHITON_1662
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc_N HHH_5 5_3_exonuc CD225
Other DBs
NCBI-ProteinID: CUX78441
UniProt: A0A160VWS8
LinkDB
Position
I:complement(1544136..1545161)
AA seq 341 aa
MGVPIGELIPRKEIELENLYGKKVAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSG
LFYRTINLMEAGIKPAYVFDGKPPEFKKKELEKRKEAREEAEVKWREALAKGDIEEARKY
AQRATRVNEMLIEDAKKLLELMGIPVVQAPSEGEAQAAYMASKGHVYASASQDYDSLLFG
APRLVRNLTITGKRKLPGKNVYVEVKPELVVLEEVLSSLKLTREKLIELAILVGTDYNPG
GIKGIGPKKALEIVRHSKDPLAKFQKQSEVDLYAIKEFFLNPPVTDEYKLQWKEPDEEGI
LKFLCDEHDFSEERVKNGLERLKKAVRAGRQSTLESWFMKR
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgggtgttcccataggtgagctaattccacgaaaggaaatagagcttgagaacttatat
gggaaaaaggttgctattgatgcccttaacgccatttaccagttcctgtccacgataagg
cagagagatggtactccactgatggattctaagggaagaataacctctcacctcagtggt
ctcttctataggacgataaatctaatggaagcaggaattaagccagcttacgttttcgat
ggaaagcctccggagttcaaaaagaaggagctagagaagagaaaggaggctagggaagag
gcagaagttaaatggagggaagcacttgcaaagggtgatatagaagaggcgagaaagtac
gcccagagggccactagggttaatgagatgctgattgaggatgcaaagaagctacttgag
ctgatgggcattccagttgttcaagccccaagtgagggtgaggcccaagcagcttacatg
gcatctaagggccacgtttacgcttctgcaagccaggattatgactcacttctatttgga
gcacccaggttagttaggaaccttaccataactggaaagaggaaactccctgggaagaac
gtttacgtggaagttaagccagaactcgttgtacttgaggaagttctctcctcgctaaag
cttacgagggagaagctgattgagctggccattctcgttggcacggactataaccctggg
ggaataaagggtataggaccaaagaaggcattggaaatagttaggcactcgaaggatccc
ttggccaagttccagaagcagagtgaagttgacctatatgccatcaaagagttcttcctc
aatcctcccgtgaccgacgaatacaagttgcagtggaaggagcctgatgaggaagggatt
ctaaagttcctctgcgatgagcatgacttcagcgaggagagagtaaaaaatggattagag
aggcttaaaaaggcagttagggcaggaagacagtcgacactggagagctggtttatgaaa
aggtga

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