Thermococcus chitonophagus: CHITON_1700
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Entry
CHITON_1700 CDS
T04536
Name
(GenBank) Transcription initiation factor B
KO
K03124
transcription initiation factor TFIIB
Organism
tch
Thermococcus chitonophagus
Pathway
tch03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHITON_1700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tch03021
]
CHITON_1700
Transcription machinery [BR:
tch03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CHITON_1700
Prokaryotic type
Archaeal type
TFB
CHITON_1700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
HARE-HTH
Sigma70_r4
RB_B
Zn_ribbon_RRN7
Zn_ribbon_LysW
HTH_Tnp_ISL3
Zn_ribbon_IS1595
A2L_zn_ribbon
Zn_ribbon_tTFIIB
Auto_anti-p27
Trm112p
FtrD-like
Lar_restr_allev
YceG
ORC6
Zn_Ribbon_Prim
FYDLN_acid
Motif
Other DBs
NCBI-ProteinID:
CUX78479
UniProt:
A0A160VUG6
LinkDB
All DBs
Position
I:1582384..1583286
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AA seq
300 aa
AA seq
DB search
MSKQRVCPVCGSTEFIYDPERGEIVCARCGYVIEENIIDMGPEWRAFDASQRERRSRTGA
PESILLHDKGLSTDIGIDRSLTGLMREKMYRLRKWQSRLRVSDAAERNLAFALSELDRIT
AQLKLPKHVEEEAARLYREAVRKGLIRGRSIESVIAACVYAACRLLKVPRTLDEISDIAR
VEKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIEILEEAYRRG
LTSGKSPAGLVAAALYIASLLEGEKRTQREVAEVARVTEVTVRNRYKELVEKLGIKVPVT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagcaaagagtttgtcctgtttgtggatcaaccgagttcatttatgaccccgaa
aggggagaaatcgtctgtgcaaggtgtggttacgtaattgaagagaacattatcgacatg
ggaccagaatggagagcgtttgacgcttctcagcgtgaaagaaggtcaagaacaggagct
ccagagagcatacttctccacgacaagggactatccacggatataggtattgacaggtct
ttgactgggctaatgagggaaaagatgtacaggcttaggaagtggcagtcaaggcttagg
gtcagcgatgcagcagagaggaacctcgcgtttgcattaagtgaactcgacaggattacc
gcccagttgaagttgccaaaacacgttgaggaggaggctgcaaggctgtatagggaggcc
gtgaggaagggactaataaggggaagatcaatcgagagcgttatagctgcctgtgtatat
gcagcctgtagattgttgaaagttcccaggaccttagatgagatatcggacatagcaaga
gtagagaagaaggagattggaaggagctaccgtttcatcgcaaggaacctgaatttaact
cccaagaagctcttcgttaagccaacagattacgttaataagtttgcagatgagctcggg
ctgagcgagaaggttagaaggagggctatagaaatccttgaagaggcctacaggaggggc
ctcacaagcggaaagagcccggctggattggttgctgccgccctctacatagcatcgctc
cttgaaggggaaaagagaacccaaagggaagttgccgaggtcgcaagggttactgaggtt
accgtaagaaacagatacaaagaacttgtggagaagctcggaattaaagttcccgttaca
tag
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