Thermococcus chitonophagus: CHITON_1785
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Entry
CHITON_1785 CDS
T04536
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
tch
Thermococcus chitonophagus
Pathway
tch03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHITON_1785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tch03021
]
CHITON_1785
Enzymes [BR:
tch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHITON_1785
Transcription machinery [BR:
tch03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CHITON_1785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
A_deaminase
DUF6076
DUF6511
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
CUX78564
UniProt:
A0A170SSE9
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All DBs
Position
I:complement(1658482..1659672)
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AA seq
396 aa
AA seq
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MVSSSTIKSLIEKKGKNLPESVKQELYEKLLKYNEKYKLTKAEVEMIVEEVVKEYERALV
EPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPMMTV
YLDEEHRYERAKAEEVARRIEGTTLENLARSTTLDLINMEFIVEIDPERLEKSGLTMEKI
LKKLQGSFKSAEFEAEGYTLIVRPKKVEKISDLRRLAEKVKKHRLKGLSGVGKTIVRKEG
DEYVIYTEGSNFKQVLKVPGVDPTRTRTNNIHEIAEVLGIEAARNAIIEEIINTMREQGL
EVDIRHIMLVADIMTLDGIVRPIGRHGVVGEKASVLARAAFEITTQHLFEAAERGEVDNL
NGVIENVLIGQPVPVGTGIVKLTMKLPLRPQKEEEV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggtctcttcctccactattaaatctttaattgaaaagaaagggaagaaccttccagag
agcgttaaacaggaactctatgagaagcttttgaagtacaatgagaagtacaagctcaca
aaggcagaagttgaaatgatagttgaagaggttgtaaaggagtacgagagagccttagtc
gaacctggtgaggctgttggtacagttgccgctcagtcaattggagagccttcaactcag
atgaccctcaacaccttccactatgcaggtgttgccgaaattaacgttaccctaggtttg
cccagaatcatcgaaatagtcgatgcgaggaagaatccttcgacgccaatgatgactgtt
tatcttgatgaagagcatcgctatgagagggcaaaggcagaggaagttgcgagaaggatt
gagggaactaccttggagaatcttgcgagaagcacaactctagatcttatcaacatggaa
tttatagttgaaatagatcccgagagactcgagaagagtgggcttacaatggagaaaatc
ttaaagaagcttcagggctcgtttaagagcgccgagtttgaggcggagggttacacgctt
atcgttaggccaaagaaagttgagaagatctcagaccttaggaggcttgccgaaaaggtt
aaaaagcaccgtcttaagggtctctcgggcgttgggaagaccatcgtaaggaaggaaggc
gatgaatacgtgatctatacggagggttcaaacttcaagcaggtccttaaagttcctggg
gttgatcccacaaggacaagaactaataacatccatgagatcgccgaagtgctgggcatt
gaggccgcaaggaatgccattatagaggagataataaacacgatgcgcgagcagggtctt
gaggttgatataaggcatatcatgctggttgctgatataatgactcttgatggcattgta
aggcccatcggtaggcacggtgtagttggtgaaaaggcaagcgtccttgcaagggcggcc
ttcgagataactacgcaacacctgtttgaggccgccgagaggggagaagttgacaacctc
aacggtgtaattgaaaacgtcctaatcgggcagcccgttccagtgggaacgggcatagtt
aagttgacaatgaagctaccactaaggccacagaaggaagaggaggtgtga
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