Thermococcus chitonophagus: CHITON_1787
Help
Entry
CHITON_1787 CDS
T04536
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
tch
Thermococcus chitonophagus
Pathway
tch03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHITON_1787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tch03021
]
CHITON_1787
Enzymes [BR:
tch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHITON_1787
Transcription machinery [BR:
tch03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CHITON_1787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
DUF5817
RUBY_RBDX
Auto_anti-p27
Zn_ribbon_NOB1
RNA_pol_Rpb2_45
UBA_NBR1_C
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
CUX78566
UniProt:
A0A160VV73
LinkDB
All DBs
Position
I:complement(1662405..1665758)
Genome browser
AA seq
1117 aa
AA seq
DB search
MRGPTVVEVTPDDLWIVMESYWQEKGLVRQHLDSYNAFIERGLQEVVDEFGGIKPDIPDF
EVKFGKIRVGQPEFQEPHGQRKPLYPMDARIRNLTYSAPLYLEMIPVIRGIEQEPVEVRI
GELPIMLKSKVCRLYGLSDEELIKLGEDPKDPGGYFIINGSERVIVSIEDIAPNRTLVER
DERQDRYVAKVFSYRHGYRALITVERKKDGILYVGIPNVPKPIKFVYIMRALGLERDKDI
VDAVGNDPEVQQILFDNLEDASDITTQQEALEYIGKLVAPGQAREYRLKRAEYVIDNNLL
PHMGVNPEDRIRKAYYLGMMALKVIELSLGRRDEDDKDHYANKRLRLAGDLLKDLFRVAF
GQLVKDIQYQMTKTYQRKGEKYTFSNIHRFIRNSIRPDVLTERIEHALATGAWPGGRTGV
SQLLDRTNYVSTLSHLRRVTSPLDREQPHFEARDLHGTHWGRICPTETPEGPNCGLVKNL
ALMSQITTAVPEKEVKEYLMSLGVVPIEVRRPSPELWRVYLNGVLIGTVEDGKALTEKIR
ADRRSGKISDVINVAYYEDVKEVYVNSDDGRVRRPLIIVENGKPRLTKEHVQAVKEGRLK
WSDLIKMGVIEYLDAEEEENAYVAMWPWEVTEEHTHLELMPAAILGLPASLVPYPEHNAA
PRNTYGAGMAKQSLGLGWANFRIRVDTRGHLLHYPQVPLVDSRIMKAVGYEDRPAGQNFV
VAVLAYHGYNMEDAIIINKASIERGLARSTFFRTYEAEEKKYLGGQTDKFEIPAPTVRGY
RGEKYYRHLDEDGLIFPESKVEGKDVLIGRTSPPRFLEERGLGSVALQERRETSVAVRPS
ERGIVDKVIITETGDGTKLVKVTVRDLRIPELGDKFASRHGQKGVIGLIVPQEDMPWTES
GIVPDLIVNPHGIPSRMTVGQLIEAIGGKVASLKGRRVDGTAFIGEPEEKLRKELEELGF
KHTGREIMYDGITGRRLEADIFVGVIYYQRLHHMVADKIHARSRGPVQVLTKQPTEGRAR
EGGLRFGEMERDVLVGHGAAMLLIERLLEESDKTEVWVCENCGHIAIEDKRRHKVYCPVC
GEEERISKVEMSYAFKLLLDELKAMVIRPKLNLTERV
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtccgacggttgtagaggttactcccgacgatctttggattgttatggagagt
tactggcaggaaaagggtcttgtaagacagcatctcgattcttacaacgccttcattgag
agaggtcttcaggaggttgttgacgagttcggtggaataaagccggacattccagatttc
gaggtaaaatttggaaaaatcagagttggtcaaccagaattccaggagccccatggtcag
agaaagcctttatatccaatggacgcgaggataaggaatcttacatattctgccccgctc
taccttgaaatgattccagtgattaggggaatagaacaggagcccgttgaggttagaata
ggtgagcttccaataatgctaaagtctaaggtctgtaggctttatggcctaagcgatgaa
gaacttatcaagctcggtgaagatccaaaggatcctgggggttacttcataattaacggt
tctgagagagttatagtatctattgaagatatagctcctaataggacgcttgttgagaga
gacgagaggcaggataggtacgtagcaaaggtattctcatatagacatggatatagagca
ttgatcaccgtagagaggaagaaagatggaattctctatgtcgggattccgaatgttcct
aagcccattaagttcgtttacatcatgagagcccttgggcttgagagagataaggacatc
gtcgatgctgttggcaatgatcctgaggttcagcaaatactctttgataacttggaggat
gcaagtgacataacgacccagcaggaggcccttgagtacataggaaagctagtagcccca
ggacaggcgagggagtacaggctgaaaagggctgaatacgtgatagacaacaacctccta
cctcatatgggtgtaaacccagaggataggattaggaaagcctactacctcggaatgatg
gccctcaaggtaattgagctttccctgggcagaagagatgaggatgacaaggatcactat
gctaacaagaggctcaggctcgccggtgatctgcttaaggacttattcagagtagcattc
ggccagctggttaaagatattcagtaccagatgacgaagacctatcaaagaaaaggtgaa
aagtatacttttagcaatatccataggttcataagaaattcaattagacccgacgttcta
acggagagaattgagcatgccctagcaactggtgcatggccaggtggaaggaccggtgtc
agccagcttcttgatagaactaactacgtctcaactctctcccacctcagaagagtaact
tcacctctagatagggagcaacctcacttcgaagctagagatctccacggaacccactgg
ggtaggatctgcccaactgagactccagaaggtccaaactgtggtctcgttaagaacttg
gccttaatgtcccagattacaactgccgttcctgagaaggaagtaaaagaatacctaatg
tctttgggtgtagttccaatagaggttagaaggccaagccctgaattatggagagtttac
ctcaatggtgttctcataggtacggttgaagacggaaaagctttgactgagaagatcagg
gcagataggagaagtgggaagataagtgatgttattaacgttgcctactacgaagatgtt
aaagaggtctacgttaacagcgatgatggtagagttaggaggcctctcataatagtggaa
aatggaaagccaaggctaactaaggaacacgttcaggccgtaaaagaaggcagactcaag
tggagcgacctaataaagatgggtgtaattgagtacctcgacgctgaggaagaagaaaac
gcctatgttgcaatgtggccctgggaagttaccgaagagcacacccaccttgagcttatg
cccgctgcaatcctcggtctgccagcttccctagtcccctatccagaacacaacgcagct
ccgagaaacacctatggggcaggtatggcaaagcagagccttggtctcggatgggctaac
ttcagaattagggttgatacgagaggccacctcctccactatccgcaggttccactcgtt
gactcgaggataatgaaggcagtaggttacgaggacagacctgcaggccagaacttcgtc
gttgccgttcttgcttaccatggttacaacatggaggatgccatcattataaacaaggct
tctatagagagaggcttggccagatcaactttcttcagaacttacgaggctgaggagaag
aagtatctcggcggtcaaactgataagttcgagatcccagccccaacggttaggggctac
aggggtgagaagtactacaggcaccttgatgaggacggtctcatattcccagagtcaaag
gttgagggtaaagatgtcctaattggaagaacttcaccaccaagattccttgaggagaga
ggtcttggtagtgtagctttacaggagaggagagaaactagcgttgctgttaggccaagt
gaaagaggtatcgttgacaaagttataatcacggaaactggagatggtactaagctcgta
aaggtcaccgtgagagaccttagaattcccgagctcggtgacaagttcgcttcaaggcac
ggtcagaagggtgttatcggtctaatcgtcccccaagaagacatgccttggactgagagc
ggaatagtaccagatcttatcgttaacccacatggtattccatcgagaatgaccgtcggt
cagcttattgaggcaataggcggaaaggtagcctcactcaagggaagaagggttgacggt
acagctttcattggggaacctgaggagaagctcaggaaagagctcgaggagctcggattc
aagcacacgggcagggagataatgtacgatggcataacaggaaggaggcttgaagcagat
atattcgtgggagttatctactaccagaggctccaccacatggttgcagacaaaatccac
gcgagaagcagaggtcctgtgcaggttctcaccaagcagccaactgagggtagggctaga
gaaggtggtctcagatttggtgagatggagcgtgacgtcctcgttggtcatggtgcggca
atgctactgatagagaggctactcgaggagagcgataagaccgaagtctgggtctgtgag
aactgtggtcacatagcaatagaggataagaggaggcacaaggtctactgtccagtgtgt
ggtgaggaggagaggattagtaaggttgagatgagctatgcgttcaagctgttgttggat
gagcttaaggctatggtgattagacccaagttaaacctcacggagagggtgtga
DBGET
integrated database retrieval system
