Thermococcus chitonophagus: CHITON_1793
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Entry
CHITON_1793 CDS
T04536
Name
(GenBank) Shwachman-Bodian-Diamond syndrome protein; predicted exosome subunit
KO
K14574
ribosome maturation protein SDO1
Organism
tch
Thermococcus chitonophagus
Pathway
tch03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHITON_1793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tch03009
]
CHITON_1793
Ribosome biogenesis [BR:
tch03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CHITON_1793
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Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
Motif
Other DBs
NCBI-ProteinID:
CUX78572
UniProt:
A0A160VU64
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All DBs
Position
I:complement(1669499..1670209)
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AA seq
236 aa
AA seq
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MPISVDKAVIARLKVHGETFEILVDPYLARDFKEGKDVPIEEILATPYVFKDAHKGDKAS
EHEMEKIFGTSDPYEVAKIILRKGEVQLTAQQRRQMLEEKKRQIATIIHRHAVDPRTGYP
HPVDRILKAMEEVGVRVDIFKDAEAQVQDVIKALRRVLPLKIEVKIIAVKIPGEYAGRAY
GEVRKFGKIKREEWGSDGSWMFLIEIPGGVEEEFYEKLNALTKGNVQTKLIERKGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgccgattagtgtggacaaggccgtgattgctagattgaaagttcacggtgagactttt
gaaattcttgttgatccttatttggccagggatttcaaagagggcaaagatgttccaatt
gaggaaattcttgcaactccttatgtgtttaaagatgcacacaagggtgataaggcaagc
gagcatgagatggagaaaatctttggcacgagtgacccctacgaagttgctaagataatt
ctaaggaaaggagaagtccaacttactgcccaacaaagaagacaaatgctggaagagaag
aagaggcagatagcgactataatccataggcatgcggtagatccaagaacgggctatccc
catccagtagatagaatattgaaggcaatggaggaagttggtgttagggttgatatattc
aaagatgccgaggctcaagttcaggatgtcataaaggcactaaggagggttctcccactg
aagattgaggtcaagataatagcagtgaagatcccaggagagtatgcaggcagggcctac
ggtgaagtaaggaagtttggaaagataaagagggaagaatgggggagcgacggctcttgg
atgttcctgatcgaaatccctgggggagttgaggaagagttttatgaaaagttgaacgcc
cttacaaagggcaatgtccagactaaacttatagagaggaagggcttatga
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