Thermococcus chitonophagus: CHITON_1820
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Entry
CHITON_1820 CDS
T04536
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
tch
Thermococcus chitonophagus
Pathway
tch03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tch00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHITON_1820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tch03019
]
CHITON_1820
03012 Translation factors [BR:
tch03012
]
CHITON_1820
Messenger RNA biogenesis [BR:
tch03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CHITON_1820
Translation factors [BR:
tch03012
]
Eukaryotic type
Release factors
CHITON_1820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
Zn_ribbon_3
TssR_VWA
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CUX78599
UniProt:
A0A160VUR7
LinkDB
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Position
I:complement(1692700..1693944)
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AA seq
414 aa
AA seq
DB search
MTQRDAQLYELKKKIDELKKIRGRGTELISLYIPAGYDISKVMQQLREEYSTAQNIKSKT
TRKNVLGALERAMQHLKLYKQTPENGLALFVGNVSEMEGVTDIRLWAIIPPEPLNVRLYR
CDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVLDELTSNVPGKTRAGGQS
ARRYERIREQETHEFMKRIGEHANRAFLPLLEKGELKGIIIGGPGPTKEEFVEGDYLHHE
LKKKIIGVVDISYHGEYGLRELVAKAADILRDHEVIRERNLVNEFLKHVVKDTGLATYGE
REVRKALEIGAVDTLLISEGYNKVRVRAKCNNCGWEELKTMSEEDFEVYKRKLNRCPKCG
SQNLSFEKWDVAEELIKMAEESGANVEIISLDTEEGQQFYRAFGGLGAILRFKI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcgtgacgctcaactttatgaattaaagaagaagattgacgagctcaagaag
atcagggggagaggaacggagttaatctcactctatattcctgccggttacgacataagc
aaggttatgcagcaacttagggaggagtatagtacagcacagaacataaaatcaaagacc
acgcgaaagaacgtgcttggagcccttgaaagggcaatgcagcaccttaagctttacaaa
caaacgccggagaatggattagctttattcgtgggtaacgttagtgagatggagggagtc
acggacataagactttgggcaataattccgccagagcccctgaacgttaggttgtatcga
tgtgatcaaacatttgttactgagccccttgaagagatgcttagggtcaaggatgcttac
ggcttaattactgttgagaagaatgaggcaactatagggcttctcaggggcaagagaatt
gaggttcttgatgagttaacctctaatgtcccaggaaagacaagagctggaggtcagtcg
gctcgaagatacgagaggattagggaacaagaaacccatgagttcatgaagagaattggg
gagcatgcaaacagggcctttcttccactccttgagaaaggcgagctcaagggcataata
attggaggtcctgggccaacgaaagaggaattcgttgaaggggactacctgcaccacgag
cttaagaagaagataattggagttgtagatattagttaccatggcgagtatgggctcagg
gagctagtggccaaggccgccgacatactcagggatcatgaagttataagggagagaaac
ctcgtcaatgaattcctcaagcacgtcgttaaggacacgggccttgcgacctacggtgag
agggaagtcaggaaagcattagagataggggccgtagataccctactgataagcgaaggc
tacaacaaggtcagggttagagccaagtgcaacaactgcggctgggaagagcttaagacc
atgagtgaggaggactttgaggtttacaaaagaaagctgaacaggtgccccaagtgcgga
agccagaacctaagcttcgagaagtgggatgtggctgaggaattaataaaaatggcagag
gaatcgggagcaaatgttgaaattatctcccttgacactgaggaaggtcagcagttctac
agggcgttcggtggacttggggctatattgagattcaagatttag
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