Tatumella citrea: A7K98_06420
Help
Entry
A7K98_06420 CDS
T04873
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tci
Tatumella citrea
Pathway
tci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7K98_06420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tci03400
]
A7K98_06420
DNA repair and recombination proteins [BR:
tci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7K98_06420
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A7K98_06420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
UB2H
DUF87
AAA_22
PRDA1_C
Motif
Other DBs
NCBI-ProteinID:
ARU93446
UniProt:
A0A1Y0LI74
LinkDB
All DBs
Position
1349747..1351777
Genome browser
AA seq
676 aa
AA seq
DB search
MSKAFKLHSEFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVLAPNKTLAAQLYGEMKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLSRGMIIDQRSILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDEIALRVELFDDEVERLSIFDPLTGQVAQTVPR
YTVYPKTHYVTPRERIIESMEEIKVELADRRRVLLENNKLLEEQRIAQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKEN
LVEYGFRLPSALDNRPLKFEEFEALVPQTIYVSATPGAYELEKSGDEVIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAEINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDRITPSMGRAIEETERRREKQQAWNTAQGIVPTRLNKKVTDILELG
QGIGRSKGKSHDKRQSSGRAAENSGQYAALTPQAMQKKITELEARMHKHAMDLEFEEAAR
VRDELHEIRALFIAAS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggctttcaaacttcactccgaatttaaaccgtccggtgaccagccagaggct
atccggcggctggaagagggtctggaagacggactggcgcaccagacattgcttggagtg
accggctcagggaaaacattcacaatagccaatgtcatcgctgaccttaaccgtccgacc
atggtgctagctccgaataaaacactggctgcccagctttacggtgaaatgaaagccttt
ttccctgataacgctgtcgaatattttgtctcttactacgattattaccagcctgaagct
tacgttcccagttcagacaccttcatagagaaggatgcctcggtcaacgaacatattgag
caaatgcgattgtcggcgactaaagcattactggaacgtcgggatgtcattgtggtggca
tcggtatcggcaatctatggactgggtgatcctgatctgtatctgaaaatgatgctgcat
ctcagccgtgggatgattattgaccaacgcagtattttgcgccgtctggcagaactgcaa
tatacccgcaatgatcaggcatttcagcgcggtacttttcgggtgcgtggcgaagttatt
gatattttccctgcggaatcagacgaaattgcactgcgggttgagctgtttgatgatgaa
gtagagcgtctgtcgatttttgatccgctgacagggcaggtcgcacagacagtgccacgt
tacaccgtctatcccaaaacgcactatgtcaccccccgggaacgtattatcgagtcgatg
gaagaaattaaggttgaactggcggaccggcgccgggtgttgctggagaataataaattg
ctcgaggagcaacgtattgcacagcgaactcagtttgacctggaaatgatgaatgaactg
ggctattgctcgggtatcgaaaactactcccgctatctgtccggacgtggtcccggagag
ccgccaccaactttatttgattatctgccggcagacggtttgctggttgttgatgaatcc
cacgtgacgataccgcagattggcgggatgtatcgtggtgaccgtgcgcgaaaagaaaat
ctggttgaatacggtttccgcctgccatctgctcttgataaccgccctctgaaatttgag
gagtttgaggcgctggttccacagacaatctatgtttcggcaacacccggcgcttatgag
ctggaaaaatccggcgatgaggtgattgatcaggtggtacggccgacagggttgctcgac
ccgattattgaagtcaggccggtggcgactcaggttgatgatctgttgtcggaaattcgt
caacgggcagaaattaatgaacgggtactggtgactacgctgaccaaacggatggctgaa
gatttgacggaataccttgaggagcatggagaacgggtacgttatctgcactctgacatc
gatacggtagaaagaatggagatcattcgtgatttgcgcttaggggaattcgatgtgctg
gtgggcattaacctcttaagggaagggctggatatgccagaagtttctctggtagccatt
ctcgatgcggataaagaaggatttttacgttcggaacgttctctgattcagacaattggg
cgtgcagcacgtaacattaacggtaaagcgattctctacggagaccgtattacgccttca
atgggtcgggccatagaagagactgaacgtcgcagagagaaacagcaagcctggaatacg
gctcagggtattgtaccgacaaggctcaacaagaaagtgaccgatattctggaactgggt
caggggattggacggagcaaaggtaaatcgcatgataaacgccagagttctggacgtgct
gctgagaacagtggtcagtatgctgcgctgaccccacaggcgatgcagaaaaaaatcacc
gaactggaagccagaatgcataaacatgcaatggaccttgagtttgaggaagcagcacgt
gttcgtgatgaactgcatgaaatccgtgctctgtttattgcagcttcctga
DBGET
integrated database retrieval system
