Tatumella citrea: A7K98_15065
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Entry
A7K98_15065 CDS
T04873
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
tci
Tatumella citrea
Brite
KEGG Orthology (KO) [BR:
tci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tci03009
]
A7K98_15065
Enzymes [BR:
tci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7K98_15065
Ribosome biogenesis [BR:
tci03009
]
Prokaryotic type
rRNA helicases
A7K98_15065
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
Cas3-like_C_2
DUF2927
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ARU94958
UniProt:
A0A1Y0LLS3
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All DBs
Position
3177428..3178774
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AA seq
448 aa
AA seq
DB search
MTVTTFSELELDESLLNALQDKNYERPTAIQAEAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVAEQARELAKYTHLDISTITGGVAYMNHA
EVFSTNQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW
RKQTLLFSATLEGEHIEDFADRLLNDPVTVEAEPSRRERKKIQQWYYRADDLEHKTRLLI
HLLNQPDASRTIVFVRKRERLHEVAEWLRQADIRCSYLEGEMVQAKRTEAIKRLTEGRVN
VLVATDVAARGIDIDDVTLVINFDLPRTADIYLHRIGRTGRAGKKGTALSLVEAHDNELL
IKIGRYLNEPLKIRTIEDLRPKTRAPSATGPKKPSKKQLEKRKQKKNEEAQKPRVKVRHR
DSKNIGKRRKPAASSAGLASGTTEESAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccacattttccgaacttgaattagatgaaagcctgctgaatgctctgcag
gataaaaactacgagcgccctactgcaattcaggcagaggcaattcctcctgcgctggaa
ggccgtgacgtcctgggttcggcgcccacagggaccggaaaaacagcggcctacttactg
ccggttttacaacatttactcgatttcccgcgtaaaaaatccggaccaccgcggatttta
atcctgactccaacccgtgaactggcaatgcaggtagcggaacaggcgcgtgagttggcg
aaatatacccacctggatatttcgacgattaccggcggtgtggcttatatgaaccacgcc
gaagtattcagcaccaatcaggatgttgtggtcgcgactaccggtcggttgctgcaatat
attaaagaagaaaactttgactgccgcgcggttgaaaccctaattcttgatgaagcagat
cggatgctggacatggggtttgctcaggatattgaaaccattgccggggaaacccgctgg
cgtaaacagacattgttattctctgccacgctggaaggcgaacatattgaagatttcgca
gatcgtctgttgaatgacccggtcactgttgaggcggagccaagtcgtcgcgagcgcaaa
aaaatccagcaatggtattaccgcgccgatgacctggaacataaaacccggttgctgatt
catctgttaaatcagccggacgccagccgtactatcgtttttgttcgcaagcgtgaacgg
ttacacgaagttgcggaatggttgcgtcaggccgatatacgttgcagctaccttgaaggt
gaaatggttcaggcaaaacgtactgaagccatcaagcgcctgaccgaaggtcgtgtgaac
gtgctggtagcgactgatgttgcggctcgtggcattgatatcgatgatgtcactctggtt
atcaactttgatttgccacgcacggctgatatttatctgcaccggatcggcaggactggc
cgcgccggtaaaaaaggcactgcactttctctggttgaagcacatgacaatgagttgctg
attaaaattggtcgctacctgaatgaaccactgaaaatcagaactatcgaggatctacgg
ccaaaaacccgggcgccttctgctacggggccgaagaagccgtcgaaaaaacagctggaa
aaacgtaaacagaagaaaaacgaagaagcacaaaaaccaagagttaaagtgcgccatcgt
gacagcaaaaatatcggaaaacgccgtaagccagcagcatcttcagccggtttggcctcc
ggaacgacggaagagtctgcagagtaa
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