Tatumella citrea: A7K98_16315
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Entry
A7K98_16315 CDS
T04873
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
tci
Tatumella citrea
Brite
KEGG Orthology (KO) [BR:
tci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tci03021
]
A7K98_16315
Transcription machinery [BR:
tci03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A7K98_16315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Flavi_DEAD
Cas3-like_C_2
AAA_34
NAT10_TcmA_helicase
Spc24
Motif
Other DBs
NCBI-ProteinID:
ARU95170
UniProt:
A0A1Y0LBX3
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All DBs
Position
3459186..3462092
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDARMVTLLFPATGENRLYARNDSPITRVIFNPGDT
ITSHEGWQLTVENVTDNDGIMTYTGVRTDTQETGVSMREVMLDSKLVFSKPQDRLFAGQL
DRMDRFALRFRARKYQSAQYRLPVSGLRGMRTNLIPHQLHIAHDVGHRHAPRVLLADEVG
LGKTIEAGMIIQQQLLAGRAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQF
DTSNPFYTEQLVICSLDFACKNKQRLEAMAEAEWDLLVVDEAHHLAWNDGKAGREYLVVE
KLAENIPGVLLLTATPEQLGMESHFARLRLLDPNRFHDYQQFVAEQQQYQPVADAVTSLL
ADHPVSAEEVAMINNLISDQDIAPLIEKANSRDEQRLEARRKLVALLMDRHGTSRVLFRN
TRQGVKGFPQRQLQQFRLPLPSQYQTAIKVSGIMGSRKSAEERARDMLYPEQIYQEFEGD
SGTWWAFDPRVEWLSNYLLENRKEKVLVICAKAATALQLEQYLREREGIRAAVFHEGLSI
IERDKASAFFASREDGAQVLLCSEIGSEGRNFQFASRLVMFDLPFNPDLLEQRIGRLDRI
GQQNDIQILVPWLENTAQAVLLRWFHEGLDAFEHTCPTGRTIYDNVHPQLLKYLASPEDT
SGLDEFIADSRQQHESLKSQLEQGRDRLLELNSNGGEQAVELADAIAAQDNDTELVNFAL
NLFDIVGINQDDRSDNLIVLTPSDHMLVPDFPGLPEDGCTITFNREQALSREDTQFITWE
HPLIRNGLDLILSGDTGSSAISLLKNKALPVGTLLVELMYVVEAQAPKHLQLTRFLPPTP
LRLLLDKAGNNLATKVEFESFNRQLTAVNRHTGSKLVNAVQQDVYQILTRGEELVVSDAQ
GVIEQARRQADETLGAELDRLRALQAVNPNIRDDEVEALETNRREVTESLAQANWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcagcgctggattagtgatacagaaagtgaacttggactgggg
acggtcgtcgctatcgatgcacgtatggtcactttactttttccggcaactggcgaaaac
agactctatgcccgcaatgattctccgatcacccgcgtcatttttaacccgggcgatacc
attaccagccatgaaggctggcagctaaccgtagaaaacgtcacagataatgacgggata
atgacttacaccggagtgcggactgatacgcaggaaaccggtgtcagcatgcgggaagtt
atgctcgacagtaaactggtattcagtaaacctcaggacagattgtttgccggtcagctt
gaccgcatggaccgttttgctctgcgttttcgtgcccgtaaatatcaaagtgctcagtac
cgtctgccggttagtggattacgtggtatgcgcaccaatctgatcccacatcagctacat
atcgctcatgatgttggtcaccggcacgctccccgggtattactggctgatgaagtcgga
ctggggaaaaccattgaggcagggatgataatccagcaacaattactggcaggccgtgcc
gaacgtgtcctgattattgtaccggaaaccctgcaacatcagtggctggtggagatgctg
cgtcgcttcaatctgcgttttgcgctgtttgatgacgaacgctataccgaagctcagttt
gataccagcaatccgttctacaccgagcaactggtcatttgctcgctggattttgcctgt
aaaaataagcagcgtctggaagcgatggctgaagccgaatgggatttgctggtggtggat
gaagcccatcacctggcctggaatgatggtaaagccggtcgtgaatatctggtggttgaa
aagctggcagaaaatattcccggagtgttgctgctgacagcaacccctgagcagctggga
atggagagccacttcgcccgtctgcggttgctcgatcctaaccgtttccatgattatcag
caatttgtggcagagcaacagcagtaccaaccggttgctgatgccgttacctcattactc
gccgatcatccggtctccgcagaagaagtcgcaatgatcaataatctgatcagcgatcag
gatatcgccccattgatcgaaaaagccaacagtcgcgatgaacaacggctggaagctcgc
aggaaactggtggcactgttgatggatcgtcatggtaccagccgtgttctgttccgtaat
acccgtcagggtgtgaaaggctttccgcaacgccagttacagcaattccgtctgccgtta
ccttctcagtaccagaccgcgatcaaagtatccggcattatgggcagccgtaagagcgcc
gaagaacgagcccgggacatgctctatccggagcagatttatcaggagtttgaaggtgac
agcggaacctggtgggcatttgatccacgcgttgagtggctgagcaattacttactggaa
aaccgcaaagagaaagtgcttgttatctgtgctaaagccgccaccgcgctgcaacttgaa
caatatcttcgtgagcgcgaaggtatccgtgccgcagtattccatgaaggtttatccatc
attgaacgggataaagcctcggcgttttttgcctcccgcgaagatggcgctcaggtcctg
ttgtgttcggagattggctcggaaggccgtaacttccagttcgccagtcgactggtcatg
tttgacctgcctttcaacccggacctgctggaacaacgtattggtcgtctggatcgtatc
ggccagcagaatgacattcagattctggtaccctggctggaaaataccgcccaggctgtg
ttacttcgctggttccatgaaggtctggatgcttttgaacatacctgccctactggtcgc
acgatctatgacaatgtacatccacagctactgaaatatctggcctcgccggaagatacc
tcagggctggatgaatttatagccgacagccgccaacaacacgaatcactgaaatcacaa
ctggagcaaggtcgcgaccggttgctggagcttaactccaacggtggagagcaggccgta
gagctggctgatgccattgccgctcaggataatgatactgaactggtcaactttgcactg
aatctgtttgatattgtcgggatcaatcaggacgaccgcagtgacaacctgattgtgctt
acaccatcagaccatatgctggtaccggacttccccgggttaccggaagatggctgtact
atcacttttaaccgtgaacaggcattgtcccgtgaagatactcagtttattacctgggaa
catccattaatccgtaacgggctggaccttattctttccggtgatactggcagcagcgct
atttcattactgaaaaacaaagcattaccggtaggtactctgctggtagaactgatgtat
gttgttgaagcgcaggcgccaaaacatctgcaactgacccgctttctgccgccgactccg
cttcgcctgttactggataaagccggcaataatctggcgaccaaagtggaatttgaaagc
tttaaccgccaactgacagcagtaaaccgtcataccggcagtaaactggtcaatgccgtc
cagcaggatgtttaccagattctgacccgtggtgaagaactggtggtcagtgatgcacag
ggggtcattgaacaggctcgtcgccaggctgatgaaacactgggggctgaactggatcgt
ctgcgggcattacaggccgtcaacccgaatatccgtgacgatgaagttgaagcactggaa
actaaccgccgtgaagtcaccgaaagcctggctcaggccaactggcgactggatgcatta
cggctgattgttgtcacacatcagtaa
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