Tatumella citrea: A7K98_18675
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Entry
A7K98_18675 CDS
T04873
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tci
Tatumella citrea
Pathway
tci03420
Nucleotide excision repair
tci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7K98_18675
03430 Mismatch repair
A7K98_18675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tci03400
]
A7K98_18675
Enzymes [BR:
tci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7K98_18675
DNA repair and recombination proteins [BR:
tci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7K98_18675
MMR (mismatch excision repair)
Other MMR factors
A7K98_18675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ARU95577
UniProt:
A0A1Y0LCE5
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All DBs
Position
complement(3978213..3980375)
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AA seq
720 aa
AA seq
DB search
MDVSDLLNSLNDNQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAV
TFTNKAAAEMRHRIEQVLGTTQGGMWIGTFHGLAHRLLRAHPLDAGLPQDFQILDSEDQL
RLLKRLIKALNLDDKQWPARQAMWYINGKKDEGLRPKHIESYGNPVEQTWLKIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNLLVDEFQDTNNIQYAWIRMLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLTDFTGAQTIRLEQNYRSTSNILKAANTLIANN
QGRLGKELWTEDGDGEPISLYCAFNELDEARFVVGRIKHWHEQGGSLADCAILYRSNAQS
RVLEEALLQSSLPYRIYGGMRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQSSRELLSEKVLAGRAASALLRFIELIDSLSRETSDLPLHVQ
TDRVVKDSGLWMMYEQENGEKGQTRIENLEELVTATRQFSYQDEDQDLMPLQAFLSHAAL
EAGEGQADKWQDAAQLMTMHAAKGLEFSQVFIVGMEEGMFPSQMSLEEGGRLEEERRLAY
VGVTRAMQKLTLTYAESRRLYGKEVYHRPSRFIGEIPEECIEEVRLRASVSRPVSHQRMG
APVTNNDSGFALGQRVRHAKFGEGTIINLEGSGEHSRVQVAFQGQGIKWLVAAYARLESA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcaacagtttaaatgataaccagcgtgaagccgttgcggca
ccgcgcagtaacctgctggtactggcaggagcgggcagcggcaagacccgcgtactggta
caccgtattgcctggttgctgacggtcgaaaactgttccccgtattccatcatggcagtg
accttcaccaataaagcggccgctgagatgcgtcatcgtatcgaacaggtgttgggaacc
acccagggcgggatgtggattggtaccttccatgggctggcacatcgtttgttacgggcc
catccgttggatgccggattacctcaggattttcagattctcgacagtgaagatcagtta
cggttactgaaacgtctgattaaagccctgaatctggatgataaacaatggcctgcccgc
caggctatgtggtacatcaacggcaaaaaagatgaaggtctgcggccgaaacatattgaa
agttacggcaatccggttgaacaaacctggctgaaaatttatcaggcatatcaggaagcc
tgtgaccgcgccgggctggtcgattttgccgaactgttattacgggcccatgaattgtgg
ctgaataaaccgcatattctgaatcattaccgcgagcgttttactaatctgttggtggac
gaattccaggatactaacaacatccagtatgcctggatacggatgctggcgggtgatacc
ggcaaagtcatgatcgttggcgatgatgatcagtcaatttacggctggcgtggtgctcag
gtggagaatattcagcgcttccttactgacttcaccggtgctcagactatccgcctggaa
caaaactaccgttcaaccagcaatattctgaaagcggccaataccctgattgccaataat
cagggaaggttaggaaaagaactgtggactgaagacggtgatggtgaacccatctcgttg
tactgcgctttcaatgagctggatgaagcccggtttgtggtcggtcgaattaagcactgg
catgaacagggtggatcgctggccgactgtgccattctttaccgcagcaatgctcagtcg
cgcgtactggaagaagccttgctgcaaagcagcctgccttatcgtatttatggcggtatg
cgctttttcgaacgccaggaaattaaagatgccctggcctatttacggctgatatctaac
cgcaatgatgacgccgcctttgagcgggtagtgaacaccccgacacgggggattggtgac
cgtactctggatgtggttcgtcaggcggcccgggaccggcaactgaccctctggcaatcc
tcccgcgagttactgtcggaaaaggtgctggccggcagagcggcttcggcgctgttacgt
tttattgagctgattgattcgttatcacgggaaaccagcgatctgcctctgcatgttcag
actgacagggtcgtgaaagactccggtttgtggatgatgtacgagcaggaaaacggagag
aaaggccagacgcgtatcgaaaaccttgaggaactggtcactgcgacccggcagttcagc
tatcaggatgaagatcaggatttgatgccgttgcaggcgtttctgtcacatgctgcgctg
gaagccggtgaaggtcaggcggataaatggcaggatgcagcgcaacttatgaccatgcat
gcggctaaaggtctggaatttagccaggtctttattgtgggcatggaagaagggatgttc
ccaagccagatgtcgttggaagagggtggacggctggaagaagagcggcgattggcttat
gtcggcgtcactcgtgctatgcagaagctgactctgacctatgccgaaagccggcgtctg
tatggaaaagaagtttaccatcgcccgtcacgatttatcggtgaaatacctgaagagtgc
atcgaagaggtccggttaagggcgagtgtcagccggccggtcagccatcaacggatgggg
gctccggtcactaacaatgatagtggctttgcgctggggcagcgggtccggcatgctaaa
tttggtgaaggtactatcattaacctggaaggtagcggtgagcattcccgggtccaggta
gcattccaggggcaggggattaaatggctggtagcggcctatgcccgtctggaaagcgca
tga
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