Tatumella citrea: A7K98_18840
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Entry
A7K98_18840 CDS
T04873
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
tci
Tatumella citrea
Pathway
tci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7K98_18840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tci03019
]
A7K98_18840
Enzymes [BR:
tci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7K98_18840
Messenger RNA biogenesis [BR:
tci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A7K98_18840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
ARU95599
UniProt:
A0A1Y0LPG0
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All DBs
Position
4008262..4009551
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AA seq
429 aa
AA seq
DB search
MSKTHLTEKKFSDFALHPKVVEALDNKGFQYCTPIQALALPYTLSGHDIAGQAQTGTGKT
MAFLTSTFHYLLSHPVAEGHKVNQPRALIMAPTRELAVQIHADAEPLATNTGLRLGLAYG
GDGYDKQLKVLEQGVDILIGTTGRLIDYAKQNYIDLSAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPAANQRLNMLFSATLSWRVRELAFEHMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQSLVEEEWPDRAIIFANTKHRCEDVWGHLAADGHRVGLLTGDVPQKKRLRILE
DFTKGQLDILVATDVAARGLHIPEVTHVFNYDLPDDREDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIEEYIGHSIPVSKYNSEALLTDLPAPKRLARRPSNNNRRGNNNNRRSGPP
RNNNRKRSG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacagaaaagaagttttccgacttcgccctgcaccctaaggta
gttgaagcccttgataataaaggatttcagtactgtacaccgattcaggcattagcactg
ccttataccctttcagggcatgatatcgcgggtcaggcgcaaaccggtacgggtaaaacg
atggcgttcctgacgtcaacgttccattatttgctgtctcatccggtggccgaaggccac
aaagtgaatcagcctcgggcattaatcatggctccaacccgcgaactggcggtacagatc
catgcagatgccgagcctctggccacaaacaccgggttgcgactcggcctggcctatggc
ggagatggctatgataaacaactgaaagtcctggaacagggtgtagatattctgattggt
acaaccggacggttgattgattatgccaaacagaactacatcgatctcagtgccattcag
gttgtggttctggatgaagccgatcgcatgttcgatctgggctttatcaaagatatccgc
tggttgttccgccgtatgcctgcggcaaatcagcgactgaatatgctgttttctgccacc
ctgtcatggcgggttcgggaactggcatttgagcatatgaataatgcagaatatgtcgaa
gttgaacctgaacagaaaacaggtcaccgcataaaagaagagctgttctacccttcaaac
gaagagaagatgcgcttactgcaatccctggttgaagaagagtggccagaccgtgcgatt
attttcgccaacaccaaacatcgttgtgaagatgtctggggacacctggcagcagacggt
caccgcgttggtttgttaaccggtgatgtaccgcagaaaaaacgcctgcggatcctggaa
gactttactaaaggtcagttggacattctggtggctaccgatgtcgcggcgcgcgggttg
catatcccggaagtgacccatgtatttaactacgatttaccggatgaccgtgaagattac
gtccaccggattggtcgtaccggcagagccggtgccagcgggcactctatcagcctggca
tgcgaagaatacgcactgaatttaccggcaattgaggaatatatcggccacagtattccg
gtaagtaaatataacagtgaagctttattgacggatttacctgcaccaaaacgtctggct
cgtcgcccgtcgaacaataaccgcaggggcaacaataataaccgtcgtagtgggcctcca
cgtaacaataaccgtaaacgttcaggttaa
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