Tatumella citrea: A7K98_20085
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Entry
A7K98_20085 CDS
T04873
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tci
Tatumella citrea
Pathway
tci03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A7K98_20085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tci03400
]
A7K98_20085
Enzymes [BR:
tci01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A7K98_20085
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A7K98_20085
DNA repair and recombination proteins [BR:
tci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A7K98_20085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf-C2HC_3
RNHCP
Motif
Other DBs
NCBI-ProteinID:
ARU95807
UniProt:
A0A1Y0LD39
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All DBs
Position
complement(4281544..4282353)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATVLHAVVRNPRLRWPVSPEILSLSDQPVLSVQRRAKYLL
LELPQGWIIIHLGMSGSLRVLAEELPAEKHDHVDLVLSNGKVLRYTDPRRFGAWLWETDL
ASSRVLAHLGPEPLSDEFSARWLQEKSQRKRIPVKQWLMDNKLVVGVGNIYASESLFAAG
ILPDRLACQLSEEDAQRLVKCIKQVLQRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRHCGTAIQSGRHGQRSTYWCPQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagttgaaaccagtcgccgtggtatagaaccacacctggtcggt
gccacggtattacatgcagtggtgcgtaacccacggttgcgttggccagtatcgccggaa
atcctgtcattaagcgatcagccagtgttaagcgtgcaacgacgcgcaaaatacctgctg
ctggagctgccacagggatggattatcatccatctgggcatgtcaggcagcctgagagtg
ttggcagaagagctacctgcagagaagcacgatcatgttgatttggttctgagcaatggg
aaagtgctgcgttataccgatccccggcgatttggtgcctggttatgggaaacggattta
gcttccagccgtgtgcttgcacatctgggaccggaacccctgagtgatgagttttctgcc
cggtggttacaggaaaaatcacagcgtaagcgtattcctgtcaaacaatggctgatggat
aacaagctggtggttggggttgggaatatctatgccagcgaatcgttgtttgctgccgga
attttgcctgacaggctggcctgccagttgagcgaagaagatgcacaacggctggtgaaa
tgcattaagcaggtactgcaacgttcaatcgagcagggcgggaccacattacgggacttt
ttgcaaagtgatggcaagcccggatatttcgcccaggaacttcaggtttatggtcgggca
ggcgaaccatgccggcattgcggtacggccattcaaagtggcagacatggacaacgcagt
acttactggtgccctcagtgtcagaaatga
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