Thauera chlorobenzoica: Tchl_0085
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Entry
Tchl_0085 CDS
T04612
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tcl
Thauera chlorobenzoica
Pathway
tcl03420
Nucleotide excision repair
tcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tchl_0085
03430 Mismatch repair
Tchl_0085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcl03400
]
Tchl_0085
Enzymes [BR:
tcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tchl_0085
DNA repair and recombination proteins [BR:
tcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tchl_0085
MMR (mismatch excision repair)
Other MMR factors
Tchl_0085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
APR02961
UniProt:
A0A1H5V5R5
LinkDB
All DBs
Position
complement(89979..92162)
Genome browser
AA seq
727 aa
AA seq
DB search
MTDKTPPATAHAVPRFQPAAFTPTAEQVAIQTNRARHVIAMANAGAAKTTTLALRIAESI
TRRVAPEHIIVLSFSAEAARVLQQRLVEVGLDPGLARRVRCTTFDDFARDTLRALEGGDT
PFLASFEALAPHVRAAVAELHRLNALRQAPRELWLPEHNAQIADFLQIARRLKTQLVRPA
LEEDETVAMRADALDIAEGVFALYRQLEKERAGDGEACRWRTVFDATYDLACLLTGSDPP
PTLPKYRMVIVDELQDMNPASYACLEHLLAQGSAFFTGAGDFDQVIHRWAGAGTNFIRSR
FGAGWHSVRRLPLTMTFRHGAAMALATAALKAKEVVSGRDHAARIEVEAYADAGDAARRT
VARVLDWQRRSRRLDRCAIILRSPDQSIAIENALLEAGIGVRVEGLESYFLRPEILMLRG
VIAFALEDYESIPGAERRLQVLQALELWQELAWATSRIEDLKTAAAQPELFDAFLQGRLL
QPQTLADRAAAGLSDDEETQAAHRLLALLARLRREGRHDEADVLLSRQRAAAQAVAETPA
QQSARVRLAGALEILRAAPADETADVALERAVAALELERVAQRIFIDPASAAAVSRSIAG
FIDAARRSGRPLREFAQWLRQAEERVAELRRRKTVLLCTVEAAKGQEFDAVILPLLEEGA
FPLAGCDRSEESNRFYVAATRMRDELTLLVPAEPARLSPFVSAMKIGDAIARARHPPAAP
DAARGRG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagaccccgcccgcaaccgcgcatgccgtaccgcgcttccagccggcggcg
ttcaccccgaccgccgagcaggttgcgatccagaccaaccgcgcccgccacgtgatcgcg
atggcgaacgcgggggcagccaagaccacgacgctggcactgcgcatcgccgagtcgatc
acgcgccgggtcgcgcccgagcacatcatcgtcctgagcttttccgccgaggcggcgcgc
gtgctgcagcagcgtctggtcgaggtcggcctcgaccccgggctcgcccggcgcgtgcgg
tgcaccaccttcgatgacttcgcccgcgacacgctgcgtgcgctggagggcggcgacacc
cctttcctggccagcttcgaggccctcgccccccatgtccgcgccgccgtcgccgagctg
caccggctcaacgccctgcgccaggcgccgcgcgagctatggctgccggaacacaacgcg
cagatcgccgacttcctccagatcgcccgccggctcaagacccaactcgtcaggccggcg
ctggaagaggacgaaaccgtggcgatgcgggccgacgcgctcgacatcgcggaaggcgtg
ttcgccctctaccgccagctcgaaaaggagcgcgccggcgacggcgaagcgtgccgctgg
cgcaccgtgttcgacgccacctacgacctcgcctgcctgctgaccggcagcgacccaccc
cccacgctgcccaaataccgcatggtgatcgtcgatgaactgcaggacatgaacccggca
agctacgcctgcctcgagcacctgctcgcccagggcagtgccttcttcaccggcgccggc
gacttcgaccaggtcatccaccgctgggccggcgccggcacgaacttcatccgcagccgt
ttcggcgccggctggcacagcgtccggcgcctgccgctgacgatgaccttccgccacggc
gcggcgatggcgctcgccaccgccgccctcaaggcgaaggaggtcgtgtccggccgcgac
catgccgcccggatcgaggtcgaggcctatgccgacgccggcgatgccgcccggcgcacc
gtcgcccgggtcctcgactggcagcggcgcagccgccggctcgaccgctgcgcgatcatc
ctgcgttcccccgaccagtcgatcgcgatcgaaaacgccctcctcgaagccggcatcggc
gtccgcgtcgaaggcctggagagctatttcctgcgccccgaaatcctcatgctgcggggg
gtgatcgcgttcgccctcgaagactacgaatcgattccgggagcggagcggcgcctgcag
gtcctccaggcgctggagctgtggcaggaactggcctgggcgacgagccggatcgaggac
ctgaagaccgccgccgcccagcccgaactgttcgacgccttcctccagggccggctgctg
cagccgcagacgctcgccgaccgcgccgccgccggactctccgacgacgaggagacgcag
gccgcgcatcgtctcctcgccctcctcgcccggctgcgccgcgaaggccggcacgacgag
gccgacgtcctgctcagccggcaacgcgccgcggcgcaggccgtcgccgaaaccccggcg
cagcaatcggcccgcgtgcgcctggccggcgcgctcgagattctgcgcgccgcgccggcc
gatgaaaccgcagacgtggcgctggaacgggcggtcgccgcgctcgagctcgagcgcgtc
gcccagcgcatcttcatcgacccggcgagcgcggcggcggtgagccgctcgatcgccggc
ttcatcgacgccgcccgccgcagcggccgccccttgcgcgagttcgcccagtggctgcgc
caggccgaggaacgggtcgccgagctgcgccggcgcaagaccgtgctgctctgcaccgtc
gaagcggccaagggccaggagttcgatgccgtgatcctgcccctgctcgaagagggcgcg
tttccgctcgccggctgcgaccgcagcgaggaaagcaaccgcttctacgtcgccgcaacg
cggatgcgcgacgagctcaccctgctcgtgcccgcggagcccgccaggctcagccccttc
gtcagcgcgatgaaaatcggcgacgcgatcgcgcgcgcccgccacccgcccgctgcgccg
gacgcggcgcggggccgggggtag
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