Thauera chlorobenzoica: Tchl_0513
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Entry
Tchl_0513 CDS
T04612
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tcl
Thauera chlorobenzoica
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcl03016
]
Tchl_0513
Enzymes [BR:
tcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Tchl_0513
Transfer RNA biogenesis [BR:
tcl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Tchl_0513
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GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
APR03384
UniProt:
A0A1H5W5S1
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All DBs
Position
complement(526315..528222)
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AA seq
635 aa
AA seq
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MFVLYEEDGAFKAGTVLADNDATLQIENTHGKRVKLKRAHVLLEFREPAPAELLARAEAG
AEELDTEFLWEVCGDDEFTFADFAAEYQGRPPNAVESAAVLLRLHSAPIWFHRKGRGRFR
KAPAEILQAALAGLEKKRLQAAAIEHMRTELVAGRLPPEIRTLLPQALYRPDRNRPEVKA
LEAACVDTGLSAARLLLACGALASSYELHYNRFLFEHFPEGVDFPAVAAPPMPAGLPRAE
VAAFSIDDASTTEIDDAFSVTPRSGGGWRVGIHIAAPALGFARGSELDAIARRRLSTVYM
PGNKITMLPDEVVHTFTLAEGRDCPAVSLYLDLTPGLAIIGEESRVELVPIVANLRHHDI
EPVFNDDTVHGDGPDFAWKRELTLLWDLATILEAGRGKAAGNEDRIDYSFSVDWTEDTAD
GPGRISIGQRSRGSPMDKLVAELMIHANMTWGKLLDAAGVPGLYRAQGGGKVRMTTVAAP
HEGLGVDCYAWSSSPLRRYVDLVNQWQIVSVLQAREPAFAPRSAELMAAMRDFELTYAEY
AEFQRGMERYWCLRWLRQHGRGEVEATVLRENVVRLAEIPLVFRVPSMPLQMPGSRVRLV
VEHTDLLDIEVDARFVRTLSEPDPETATEPGFGFA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgctgtatgaagaggacggggccttcaaggccggcaccgtcctcgccgataac
gatgccacgctgcagatcgagaacacccacggcaagcgggtgaagctcaagcgcgcccat
gtcctgctcgaattccgcgagcccgctccggcggaactgctcgcccgcgccgaagccggc
gccgaggaactggacaccgagttcctgtgggaagtgtgcggcgacgacgagttcacgttc
gccgacttcgccgccgaataccagggccgcccgccgaacgcggtggagtcggcggccgtg
ctgctgcgcctgcattcggcgccgatctggttccaccgcaagggccgggggcggttccgc
aaggcgccggccgagatcctccaggcggcactcgccgggctcgagaaaaagcgcctccag
gcggccgcgatcgagcacatgcgcaccgaactggtcgccggccggctgccccccgagatc
cggaccctgctgccgcaggcgctctaccgccccgaccgcaaccgcccggaagtcaaggcg
ctcgaagccgcctgcgtcgacaccgggctgtcggcagcgcgcctgctgctcgcctgcggc
gcgctcgcctcgagttacgagcttcattacaaccgcttcctgttcgagcactttcccgaa
ggcgtggacttccccgccgttgccgcgccgccgatgcccgctggcctgccgcgcgcggaa
gtcgccgcgttctcgatcgacgacgcctccaccaccgagatcgacgacgccttctcggtg
accccgcgcagcggcggcggctggcgcgtcggcatccacatcgccgccccggcgctgggc
ttcgcccgcggctcggagctggacgcgatcgcccgtcgccgcctgtccacggtgtacatg
ccgggcaacaagatcaccatgctgcccgacgaggtcgtgcacaccttcaccctcgccgaa
gggcgcgactgccccgccgtatcgctgtacctcgacctcacccccgggctggcgatcatc
ggcgaggaaagccgggtcgaactcgtacccatcgtcgccaacctgcgccaccacgacatc
gagccggtgttcaacgacgacaccgtgcatggcgacggccccgacttcgcctggaagcgc
gagctgaccctgctgtgggacctggccaccatcctcgaggccggccgcggcaaggccgcg
ggcaacgaggaccgcatcgactacagcttcagcgtggactggaccgaggacaccgccgac
ggccccggccggatcagcatcggccagcgctcgcgcggttcgccgatggacaagctggtc
gccgagctgatgatccacgccaacatgacctggggcaaactgctcgacgccgccggcgtg
cccggcctgtaccgcgcccagggcggcggcaaggtgcgcatgaccacggtcgccgcgccc
cacgaaggcctcggcgtggactgctacgcgtggtccagttcgccgctgcggcgctacgtg
gacctggtcaaccagtggcagatcgtctccgtgctgcaggcccgggagccggccttcgcg
ccgagatcggccgagctgatggcggcgatgcgcgacttcgagctcacctacgccgaatac
gccgagttccagcgcggcatggaacgctactggtgcctgcgctggctgcgccagcacggt
cgcggcgaagtcgaagccaccgtgctgcgcgaaaacgtcgtgcgcctggccgaaatcccg
ctcgtcttccgcgttccctcgatgccgctgcagatgcccggcagccgggtgcgcctggtc
gtcgagcacaccgacctgctcgacatcgaagtcgacgcccgcttcgtgcggaccttatcc
gaacccgacccggaaaccgccaccgagcccggattcggtttcgcctga
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