Thauera chlorobenzoica: Tchl_1097
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Entry
Tchl_1097 CDS
T04612
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
tcl
Thauera chlorobenzoica
Pathway
tcl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tchl_1097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcl03021
]
Tchl_1097
Transcription machinery [BR:
tcl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tchl_1097
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_24
Motif
Other DBs
NCBI-ProteinID:
APR03956
UniProt:
A0A1H5VWA8
LinkDB
All DBs
Position
complement(1153993..1154514)
Genome browser
AA seq
173 aa
AA seq
DB search
MRTALSLDPASDPIAALYRDHHGWLHTWLRKKLGCSHQAADIAQDTFVRVMGSRAQSSDT
ACWAESHAYLTTVARNLVVDHWRRQELERAYLAAIALLPEPEAPSPETRLLILESLLRID
KCLAALPAVTRRIFLRSQLDGLIYADIATEMELSLATVKRHMSRAFLACLQAA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaccgcgctttctctcgaccccgcatctgatcccattgcagcgctctaccgcgac
caccacgggtggctgcacacttggctgcgcaagaagctgggctgctcacaccaggcagcg
gacatcgcccaggacaccttcgtccgggtcatgggcagccgggcgcagtccagtgacacg
gcctgctgggcggaatcccacgcttatctgaccacggtcgccaggaacctggtggtggac
cactggcgcaggcaggagctggagcgagcctacctggcagccatcgccctgctaccagag
ccggaggcgccctcaccggaaacccgcctgctgatcctcgaatccctgctgcgcatcgac
aagtgcctcgccgccctgcctgctgtcacccggcgcatcttcctgcgctcgcagctggat
ggcctgatctacgccgacatcgccaccgaaatggaactgtcactcgctaccgtcaagcgc
cacatgagccgggcgttcctggcctgccttcaagcagcatga
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