Thauera chlorobenzoica: Tchl_1587
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Entry
Tchl_1587 CDS
T04612
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
tcl
Thauera chlorobenzoica
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
V4R
HTH_8
AAA_5
Mg_chelatase
AAA_2
HTH_28
AAA
RsgA_GTPase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
APR04446
UniProt:
A0A1H5WI01
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Position
1709056..1710885
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AA seq
609 aa
AA seq
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MIKSKGRAATGEEGSEFSASQLGDYASSRADARPSLSDISACLSFSPDDGYIWLNDQRMI
LMHGNAFGALRRELIDSLGMEKARGLFTRLGYIAGARDARMEQARWPDADLSALYKARLH
SFEGMVKVEPVRFNFDQKNGQFDGEYLWHHSIEADEHIAAYGLGTAATCWMLTGYAMGHG
STLLGHLVIAREVSCRSMGDSVCRLIAKSAELWDDITEDMRRLNAEDFVGSPTGSRASSV
VVPVTGLKDSAGMLAQNAPYHAAMVGASAAFNAACHQLRRVAGTDATVLFTGESGVGKEV
FANMLHRISTRAENPFVAVNCAAIPDTLIESELFGVERGAYTGAVASRPGRFERADGGTL
FLDEIGTLSPIAQGKLLRALQEGEIERVGGSRSTRVDVRVVAATNVDLRQAVQDGNFRED
LFYRLNVFPIRLPPLRARKDDIPLLMNHFLNYYCDKYHRKVVGFTPAVIRAFLSYEFPGN
IRELQNLVERGVISAEDDGVIDLPNLFTSGETLPPDVLSIAMGAGKGVLRNAQSETGEVP
DTSPDLLQMLLQTQGDGKSISLEEIERTLVENAVSVSNGNYSAAARLLGITRSQLAYRCE
KYKLAGGEG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaagcaaaggcagggctgcgaccggagaagaaggctcggaattctcggcatcg
cagctcggagactatgccagctcgcgcgctgacgcccggccatcgttatcggacatttcg
gcatgtctgtcgttttcgcctgatgacggatatatctggctcaatgatcagcgcatgatc
ttgatgcatggcaatgcattcggagcactgcggcgcgagctgatcgacagtctgggaatg
gaaaaggcaagaggtttattcacccgcctgggctatatcgcgggagcgcgcgatgcccgc
atggagcaggcccgctggcccgatgccgatttgtccgcactgtacaaggcccgcctgcat
tcctttgagggcatggtcaaggtcgagccggtgagattcaacttcgaccagaagaacggc
cagttcgacggtgagtacttatggcatcactcgatcgaggcggacgagcacatcgccgcc
tatggcctggggactgcagcgacctgctggatgctgaccggttatgcgatggggcacggg
agcaccctgctcggacacctcgtgattgcgcgtgaagtcagttgccggtcgatgggggat
tccgtgtgccgcctgatcgcaaaatcggctgagctgtgggacgacatcaccgaggacatg
cggcgtctcaatgccgaagactttgtcggctctccgacgggcagtcgtgcctcttccgtg
gtggtgccggtgaccgggctgaaagacagcgcgggaatgcttgcgcagaatgcaccctat
cacgccgcaatggttggtgcgtcggccgctttcaatgcagcctgccatcagctccggcgc
gtcgccggtactgatgccactgtcctgtttacgggggagtccggggtcggtaaggaagtg
ttcgccaacatgctccaccgcatcagcacgcgggctgaaaaccccttcgtcgccgtcaac
tgtgccgcgataccggacacgctgatcgagtccgaactgttcggtgtcgagcgtggtgcc
tataccggagcggttgcgtcgcgtcccggccgattcgagcgggccgatggcggaaccttg
ttcctggatgaaatcgggacattgagtccgatcgcgcagggaaagctgctacgagcgctg
caggaaggggaaatcgaacgagtcggaggcagccggagcacccgggtcgacgtgagagtg
gttgctgcgaccaatgtcgatttgcggcaggcggtgcaggatggaaattttcgcgaggat
ctgttctaccgattgaacgtgttccccattcgactccctccgcttcgcgctcgcaaggac
gatattccgctgttgatgaatcatttcctgaactattactgcgacaagtaccatcgaaaa
gtggtgggtttcacgcccgcagtcatcagagccttcctctcgtacgaattccccggaaac
ataagagaactgcaaaacctggtcgagcgcggcgtgatttctgccgaggatgacggggtg
atcgacttgccaaacctgttcaccagtggtgaaaccctgccgccggatgtcctgtcgatt
gcgatgggggcgggaaagggcgtgctcaggaatgcgcagtccgaaaccggcgaagtccct
gatacgtcacccgacctgctgcagatgttgctgcagacgcaaggagacggaaaaagcatt
tccctggaagaaatagaacggaccctggttgagaacgcagtatccgtttcaaatgggaat
tactccgctgcggcacgactgcttggcattacccggtcgcaactggcgtatcgatgcgaa
aaatacaagctcgctggcggcgaaggctga
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