Thauera chlorobenzoica: Tchl_1640
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Entry
Tchl_1640 CDS
T04612
Name
(GenBank) ECF Sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
tcl
Thauera chlorobenzoica
Pathway
tcl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tchl_1640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcl03021
]
Tchl_1640
Transcription machinery [BR:
tcl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tchl_1640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
Rv2175c_wHTH
Sigma70_r3
MerR
HTH_28
HTH_IclR
HTH_24
TnsD
Motif
Other DBs
NCBI-ProteinID:
APR04498
UniProt:
A0A1L6FC63
LinkDB
All DBs
Position
complement(1764972..1765469)
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AA seq
165 aa
AA seq
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MSPSPTVAELYHAHRGWLLNWLRRRLGCPHDAGDLAQDTFVRVLLRADRDHPREPRAYLA
TLAHGLLVDHLRRRDLERAYLAELAARPEAVQPSAEDLAIAVDTLRAIDRLLDGLAPKVR
AAYLYSRLDGLAHAEIAALLGVSVSRVRQYLSTAARHCYAQRYAG
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccccagccccaccgtcgccgagctctaccacgcccaccgcggctggctgctgaac
tggctgcggcgccggctcggctgcccccacgacgccggcgacctggcccaggacaccttc
gtccgcgtgctgctgcgggccgaccgcgaccacccccgcgagccgcgcgcctacctcgcg
actctcgcccacggcctgctcgtggaccacctgcgccggcgcgacctcgagcgcgcctac
ctcgccgagctggccgcgcggcccgaagcggtgcagccctcggcagaggatctcgccatc
gccgtcgacaccttgcgcgccatcgaccgcctgctcgacggcctcgcccccaaggtgcgc
gccgcctacctgtacagccgcctcgacggcctcgcccatgccgagatcgccgccctgctc
ggcgtctcggtgtcgcgcgtgcgccagtacctgagcaccgccgcacgccactgctatgcg
cagcgctatgccggctga
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