| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase beta' subunit
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| KO |
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| Organism |
tcl Thauera chlorobenzoica
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tcl00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tchl_1745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:tcl03021]
Tchl_1745
03400 DNA repair and recombination proteins [BR:tcl03400]
Tchl_1745
Enzymes [BR:tcl01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tchl_1745
Transcription machinery [BR:tcl03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tchl_1745
DNA repair and recombination proteins [BR:tcl03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tchl_1745
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1882788..1887002
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| AA seq |
1404 aa
MKSLLADLFKQTLPSEEEFDAITIGLASPDKIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVVEPGMTPLNRGQLLTEDDYLAKVEEYGDEFDA
VMGAEGIGSLLRTLDVNLEVEKLRGDLETTNSEAKIKKYSKRLKVLEAFQQSGIKPEWMV
LQVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVG
PTLKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKQAKKMVETQEPVVWDILEEVIRE
HPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCVAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYATREGVNVPGEGMIFTDVSEVKRAYE
SGQIALHARITVRLKEADLGPDGERIERIVRHNTTAGRAILSEILPAGLPFSVIDKPLKK
KEISKLINVSFRRCGLRASVIFADKLMQYGYGLATRAGLSIAVKDMLVPKAKEELIRAAE
SEVKEIAQQYTSGLVTDGERYNKVVDIWGRCGDQVAKAMMDQLGSEEVVDREGKTVRQES
FNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITTNFREGLNVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTRDGFAMKALIEGGEVVEPLRER
ILGRVCADDVVDPESQETVIEAGSLLDEDAVELIENLGVDEVKVRTPLTCETRYGLCAKC
YGRDLGRGSMVNVGEAVGVIAAQSIGEPGTQLTMRTFHVGGAASRAAAASGVEAKSGGTI
RFAGNMRYVANAKGEKVVIARSAELVVADDLGRERERHKLPYGATLLIDDGAAVKAGTQL
ASWDPHTRPIVTEYAGTVKFENVEEGVTAAKQIDEVTGLSTLVVIDAKRRSTTGSTKGVR
PQVKLLDERGEEVKIAGTEHSVAITFQVGSLITVKDGQQINVGDILARIPQESAKTRDIT
GGLPRVAELFEARAPKDAGMLAEYTGTVSFGKETKGKQRLVITEPDGTSHEFLIPKDKHL
MVHDGQVVNKGELIVDGPADPHDILRLQGISELARYIIDEVQDVYRLQGVKINDKHIEVI
VRQMLRRVVITDACDTRFIREEQVERSEVLDENDRIEAEGKLPAQYENVLLGITKASLST
DSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHRSRKAQEEGA
DLGLEHAWAPAENVVETQQDIEAS |
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| NT seq |
4215 nt +upstreamnt +downstreamnt
atgaagagcctgcttgctgacctgttcaagcaaaccctccccagcgaggaagaattcgac
gcgatcaccatcggtctcgcgtcgccggacaagatccgctcgtggtcctacggcgaagtc
aagaagccggaaaccatcaactaccgtacgttcaagcccgaacgcgacggcctgttctgc
gccaagatcttcggcccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcctc
aagcaccgcggcgtgatctgcgagaagtgcggcgtcgaggtgaccctgtccaaggtgcgc
cgcgagcgcatgggccacatcgagctggccagcccggtcgcccacatctggttcctgaag
agcctgccgagccgcctcggcatggtgctcgacatgaccctgcgcgacatcgagcgcgtg
ctctacttcgaagccttcgtcgtcgtcgagcccggcatgaccccgctcaatcgcggccag
ctgctgaccgaagacgattacctcgccaaggtcgaggagtacggtgacgaattcgacgcg
gtgatgggggccgaaggcatcggctcgctgctgcgcacgctcgacgtcaatctcgaagtc
gagaagctgcgcggcgatctcgagaccaccaactccgaagccaagatcaagaaatactcg
aagcgcctgaaggtgctcgaggccttccagcagtccgggatcaagcccgagtggatggtg
ctgcaggtgctgccggtgctgccgcccgacctgcgcccgctggtgccgctcgacggcggc
cgtttcgcgacctcggatctgaacgacctctaccgtcgcgtcatcaaccgcaacaaccgc
ctcaagcgcctgctcgaactcaaggcgcccgacatcatcgtgcgcaacgaaaagcgcatg
ctgcaggaagcggtcgactcgctgctcgacaacggccgccgcggcaaggcgatgaccggc
gccaacaagcgcccgctgaagtcgcttgccgacatgatcaagggcaagggcggccgcttc
cgccagaacctgctcggcaagcgcgtcgactactcgggccgttcggtgatcgtcgtcggc
ccgacgctgaagctgcaccagtgcggcctgcccaagctgatggcgctcgagctgttcaag
cccttcatcttcaacaagctcgagctgatggggctggcgacgaccatcaagcaggcgaag
aagatggtcgagacccaggagccggtggtgtgggacatcctcgaagaggtcatccgcgaa
catccggtgatgctcaaccgcgcgcccacgctgcaccgcctcggcatccaggccttcgag
ccggtgctgatcgagggcaaggcgatccagctccatccgctcgtctgcgtcgccttcaac
gccgacttcgacggcgaccagatggcggtccacgtgccgctctcgctcgaggcgcagatg
gaagcccgcaccctgatgctggcctccaacaacgtgctctcgccggccaacggcgaaccg
atcatcgtcccctcccaggacatcgtgctcggcctctactacgccacccgcgagggcgtg
aacgtgccgggcgaagggatgatcttcaccgacgtatcggaagtgaagcgcgcctacgag
tccggccagatcgccctccacgcgcgcatcacggtgcgcctgaaggaagccgacctcggc
cccgacggcgagcgcatcgagcgcatcgtgcgccacaacacgaccgccgggcgtgccatc
ctgtccgagatcctgcccgccgggctgcccttcagcgtcatcgacaagccgctgaagaag
aaggaaatctccaagctgatcaacgtctcgttccggcgttgcggcttgcgtgcgtcggtg
attttcgccgacaagctgatgcagtacggctacggcctggcgacgcgcgccgggctgtcg
atcgcggtcaaggacatgctcgtgcccaaggcgaaggaagagctgatccgtgccgccgag
agcgaggtcaaggagatcgcccagcagtacacttcaggcctggtgaccgacggcgagcgc
tacaacaaggtcgtcgatatctggggccgctgcggcgaccaggtggccaaggcgatgatg
gaccagctcggctcggaagaggtcgtcgaccgcgaaggcaagaccgtgcgccaggagtcg
ttcaacgccatctacatgatggccgactcgggcgcgcgcggttcggcagctcagatccgt
cagctcgccggcatgcgcggcctgatggcgaagccggacggctcgatcatcgagaccccg
atcacgaccaacttccgcgaaggcctcaacgttctgcagtacttcatctcgacccacggc
gcacgtaagggcctcgccgacaccgcgctgaagaccgcgaactcgggctacctgacccgc
cgcctggtcgacgtcacccaggatctggtggtgatcgaggacgactgcggcacgcgcgac
ggcttcgcgatgaaggcgctgatcgaaggcggcgaagtggtcgagccgctgcgcgagcgt
atcctcggccgcgtctgcgccgacgacgtggtcgatcccgagtcccaggaaacggtgatc
gaggccggcagcctgctcgatgaggacgcggtcgaactgatcgagaacctcggcgtggac
gaggtcaaggtgcgcaccccgctgacctgcgagacccgttacggcctgtgcgccaagtgc
tacgggcgcgacctgggccgcggttcgatggtcaacgtcggcgaagcggtgggcgtcatc
gccgcgcagtcgatcggcgagccgggcacccagctgacgatgcggaccttccacgtcggt
ggcgcggcgtcgcgggcggcggcggcgagcggtgtcgaggcgaagtcgggcggcaccatc
cgctttgccggcaacatgcgctacgtggccaacgccaagggcgaaaaggtcgtcatcgca
cgctcggccgagctcgtggtggccgatgatctgggacgcgagcgcgagcgccacaagctg
ccttacggcgcgaccctgctgatcgatgacggcgctgcagtgaaggcgggcacccagctg
gcgtcgtgggatccgcacactcgcccgatcgtgaccgaatacgccggtacggtgaagttc
gagaacgtcgaggagggtgtcaccgccgccaagcagatcgacgaagtgaccggcctgtcc
accctggtcgtgatcgacgccaagcggcgctcgaccaccggcagcaccaaaggcgtgcgc
ccgcaggtgaagctgctcgacgagcgcggtgaggaggtcaagatcgccggtaccgagcac
tcggtggcgatcaccttccaggtcggttcgctgatcacggtgaaggacggccagcagatc
aacgtcggcgacatcctcgcccgcatcccgcaggagtcggccaagacgcgcgacatcacc
ggcggcctgccgcgtgtcgccgagctcttcgaggcgcgcgcgccgaaggacgccgggatg
ctcgccgaatacaccgggacggtgtcgttcggcaaggagaccaagggcaagcagcgcctg
gtgatcaccgagccggacggcacttcgcacgagttcctgatcccgaaggacaagcacctg
atggtccatgacggccaggtggtgaacaagggcgaactcatcgtcgacggccccgccgat
ccgcacgacatcctgcgcctgcaggggatcagcgaactggcacgctacatcatcgacgag
gtgcaggacgtctatcgcctgcagggcgtcaagatcaacgacaagcacatcgaggtgatc
gtccgccagatgctgcgccgcgtggtcatcaccgatgcctgcgatacccgcttcatccgc
gaagagcaggtggagcgctccgaagtgctggacgagaacgaccgcatcgaggccgaaggc
aagctgccggcgcagtacgagaacgtgctgctgggcatcaccaaggcttcgctgtcgacc
gactccttcatctcggcggcctcgttccaggaaaccacccgggtgctgaccgaggcggcg
atcatgggcaagcgcgacgagctgcgcggcctcaaggaaaacgtcatcgtcggccgcctg
atcccggccggcaccggcctcgcctaccaccgcagccgcaaggcccaggaggaaggggcg
gatctcggtctcgagcatgcctgggcacccgccgaaaacgttgtcgaaacgcagcaggac
atcgaggccagttga |
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