Thauera chlorobenzoica: Tchl_1886
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Entry
Tchl_1886 CDS
T04612
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tcl
Thauera chlorobenzoica
Pathway
tcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tchl_1886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcl03400
]
Tchl_1886
Enzymes [BR:
tcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Tchl_1886
DNA repair and recombination proteins [BR:
tcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tchl_1886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
APR04733
UniProt:
A0A1H5XAG3
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All DBs
Position
2026386..2030114
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AA seq
1242 aa
AA seq
DB search
MTDVDLSPGLILIHGNQAESLRDLLVTWMKRHPLAPLETEMVLVQSNGIAQWLKFALAAD
AGRGGCGIAAGLSFSLPSRFLWQAYRAVLGRDAVPEVSPFDETRLRWRLMRILPALGAEP
VYRPLQRFLDDDADLRKRFQLAERVADLYDQYQVYRADWLAAWARGEDVLIDARGEVSPL
PEDQRWQAALWRHLHADIGAARPATGGAARAAGGRATVHEAFLERARALADSPRPPALPR
RVLVFGISALPRQSLEVLAALAQWSQVLMCVHNPCEHYWADIVSGQDLLRARASRQARKP
GSPPALSEEALHLHAHPLLAAWGKQGRDTIALLDEHDDPGARAGHQHRFAAIGERIDLFV
ATAGATLLQQLQDDIRALRSLPEIRRLGRTVDPASDRSLCFHVAHSRQREVEILHDQLLA
AFDADPGLRPRDVIVMVPDIDAYAPHIEAVFGLNEPHDRRFIPFSLADQGPRRIDPLLNA
LECLLGLPQSRLAVSDVLDLLEVPALRARFGLAADDVAVLHRWIRGANIRWALHGEQRTQ
LALPDAGEAAPNSWLFGLRRMLLGYAAGIEAAPWQDIEPYGEIGGLDAALLGPLAMLLAR
LDDAWRMLRTPATPRAWGERLRALLAHFFAPATAADAYTLSRLEAALQRWLDACDEAALD
EPLPLAVVAGHWLDSVDDGGLGQRFFAGAVTFATLMPMRAIPFRHICLLGMNDGDYPRTR
EPLDFDLMGRDYRPGDRSRREDDRYLFLEALLSARERLYVSWVGRSINDNTERPPSVLVG
QLRDHLGAGWRLAGDKVSSAAEAARALLAALTVGHPLQPFSMRYFAPDPAPSALFTYAHE
WRRGAPPASAAGAAALPPMPREEPLSVGELADFLHDPVKAFFRRRLGVAFEHEDPASTDV
EPFVLDGLQKWQLQDELITAQADALDRGEAPAAAREACLGAIRRRGELAAGAFGERLATE
LAEPMEALFDAYAQALARWPRKVEGEFELRFEAVCDGVRLELADWLGGLRCSDGDGGGEA
KIAEGAGAGGAAAGAVPGASSAVIVLERSDLVKERHYRGEKLIRHWVRHLAWQCARGAVT
TVVVSKKGVVVLAPLEAAAAAERLRDLLAAWQAGMGRPLPLPPRTAFAWLRARPGSAHGG
EVERGDGEREEGSVAGKALAAARTVYEGGYGNDGELGASPYLRRAFPDFDALVGGGEFQA
LAEHLLRPLQDAIHQRAEGAEGERRGRRNGGAGDAGSGRSRK
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgtcgacctctctcccggcctgatcctgatccacggcaaccaggccgagtcc
ctgcgcgacctgctcgtcacctggatgaaacgtcatccgctcgcgccgctggagaccgaa
atggtcctggtgcagagcaacggcatcgcgcagtggctcaagttcgcgctcgccgccgac
gccgggcggggcggctgcggcatcgccgcggggctgtcgttctcgctgccgtcgcgcttc
ctgtggcaggcctatcgtgcggtgctcgggcgcgatgcggtgccggaggtctcgccgttc
gacgagacgcgcctgcggtggcggctgatgcgcatcttgccggcgctcggtgccgagccg
gtgtaccggccgctgcagcgcttcctcgatgacgatgccgacttgcgcaagcgcttccag
ctcgccgagcgtgtcgccgacctgtacgaccagtaccaggtgtaccgtgccgactggctg
gcggcgtgggcgcggggggaggatgtgctgatcgacgcccgtggcgaggtgtcgccgctg
cccgaggaccagcgctggcaggccgcgctgtggcgccacctgcatgccgacatcggggcg
gcgcgcccggcaacgggcggtgcggcacgggcggcgggcgggcgtgccaccgtgcacgaa
gccttcctcgagcgcgcccgcgcccttgccgactcaccgcgaccgcctgcgctgccgcgc
cgggtgctggtgttcggcatctccgcgctaccgcgccagtcgctcgaagtgctggccgcg
ctcgcgcagtggtcgcaggtgctgatgtgcgtgcataacccgtgcgagcattactgggcg
gacatcgtctccgggcaggacctgctgcgcgcgcgcgcgtcgcgccaggcgcgcaagccg
ggttcgccgcccgcgctgagcgaggaggcgctgcacctgcacgcccatccgctgcttgcg
gcatggggcaagcaggggcgcgacacgatcgcgctgctcgacgagcacgacgaccccggc
gcccgggccggccaccagcaccgcttcgccgccatcggcgagcgcatcgacctctttgtc
gccactgccggtgccaccctgttgcagcagctccaggacgacatccgtgcgctgcgttcg
ctgcccgaaatccggcgtctcgggcgcacggtcgaccccgccagcgaccgctcgctgtgc
tttcacgtcgcccacagccggcagcgggaagtcgagatcctccacgaccagcttctcgcc
gccttcgatgccgaccccgggctgcgtccgcgcgacgtgatcgtcatggtccccgacatc
gacgcctacgccccccacatcgaggccgtgttcgggctgaacgagccccacgaccggcgc
ttcatccccttcagcctggccgaccagggcccgcgccgcatcgacccgctgctcaatgcg
ctggagtgcttgctcggcctgccgcagtcgcggctggcggtcagcgacgtcctcgacctg
ctcgaagttccggcgctgcgcgcgcgcttcgggctcgccgcggatgacgtggcggtgctc
caccgctggatccgcggggccaacatccgctgggcgctgcacggcgaacagcgcacccag
ctggcgctgcccgacgccggcgaggcggcgccgaacagctggctgttcggcctgcgccgg
atgctgctggggtacgcggcggggattgaggcggcgccgtggcaggacatcgagccctat
ggcgagatcggcggcctcgatgccgcgctgctcggccccctcgccatgctcctcgcccgc
ctcgacgacgcctggcgcatgctgcgcacgccggccacgccgcgcgcctggggcgagcgc
ctgcgcgccctgctcgcgcacttcttcgcgccggcgacggcggccgacgcctacaccctg
tcgcgcctcgaggccgcgctccagcgctggctcgacgcctgcgacgaggcggcgctggac
gagcccctgccgctggcggtggtggccggacactggctcgacagtgtcgacgacggcggc
ctcggccagcggtttttcgccggcgcggtgaccttcgccacgctgatgccgatgcgcgcg
atcccgttccgccacatctgtctgctggggatgaacgacggtgattatccgcgcacccgc
gagccgctcgacttcgacctgatggggcgcgactatcgccccggcgaccgctcgcggcgc
gaggacgaccgctacctgttcctcgaggcgctgttgtcggcgcgcgaacgcctgtacgtg
tcgtgggtggggcgcagcatcaacgacaacaccgagcgcccgccttcggtgctggtcggc
cagctgcgcgaccacctcggcgccggctggcgcctggcgggcgataaggtgtccagcgcg
gcggaggcggcgcgggcgctgcttgcggcgctcaccgtcgggcacccgctccagcctttc
agcatgcgctacttcgcccccgatccggccccgtcggcgctgtttacctatgcccacgaa
tggcgtcgcggcgcgcctccggcgtccgccgccggggccgccgcgctgccgccgatgccg
cgcgaagagccgctcagcgtgggcgagctggccgatttcctgcacgatccggtgaaggcc
ttcttccgccgccgcctcggggtcgcgttcgagcacgaggatccggcgagcacggatgtc
gagccgttcgttctcgacggcctgcagaagtggcagctgcaggacgaactgatcaccgcc
caggccgatgccctggaccggggcgaggccccggcagcagcgcgcgaagcctgcctgggg
gcgatccgccgtcgcggcgagctggccgcgggggccttcggcgagcgcctcgcgaccgag
ttggccgagccgatggaggccttgttcgacgcctacgcccaggccctcgcacgctggccg
cggaaggtggagggcgaattcgagctgcgcttcgaggcggtatgcgacggcgtccgcctc
gaactcgccgactggctcggcggcctgcgctgcagcgacggtgacgggggcggcgaggcc
aagatcgcagagggagcgggcgcgggaggagccgccgcgggcgccgtcccgggcgcctca
tccgccgtcatcgtgctcgaacgcagcgacctggtgaaggagcgccactaccgcggcgaa
aaactgatccgccactgggtccggcacctggcctggcagtgcgcccggggcgcggtgacc
acggtggtggtgagcaagaaaggggtggtcgtgctcgcgccgctcgaggccgccgctgcc
gccgagcgcctgcgcgacctgctcgccgcctggcaggccggaatgggccgccccctgccg
ctgcctccccggaccgcattcgcctggctgcgcgcgcggcccggctccgcgcacggcggg
gaggtggagcggggggacggggagcgggaggaagggagcgtagccggcaaggcgctggcg
gcggcgcggacggtctacgaaggcggctacggcaatgacggcgaactgggtgccagtccc
tatctgcgccgcgcctttcccgacttcgatgccctcgtcggcggcggcgagttccaggcg
ctggccgagcacctgctgcgcccgctgcaggacgccatccaccagcgggcggagggggcg
gagggggaacggcgagggcggaggaacggtggggcaggggatgcaggaagcgggaggagc
cggaagtga
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