Thauera chlorobenzoica: Tchl_1888
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Entry
Tchl_1888 CDS
T04612
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tcl
Thauera chlorobenzoica
Pathway
tcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tchl_1888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcl03400
]
Tchl_1888
Enzymes [BR:
tcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Tchl_1888
DNA repair and recombination proteins [BR:
tcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tchl_1888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
Helicase_RecD
UvrD-helicase
SLFN-g3_helicase
CobW_C
AAA_33
NTPase_1
T2SSE
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
APR04735
UniProt:
A0A1H5XAE8
LinkDB
All DBs
Position
2034135..2036366
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AA seq
743 aa
AA seq
DB search
MIPALPTPFPALLPLPGAPAPADSARQAAGDPAGDARGRMQALIARWAQRGWLRPLDAAF
AGFLWREVPDADPLLVLAAALASHQLGRGHVCLDLAATLADPALALSLPPEAADGEDEGA
DDLPARVLAGLELARWQRALDDPRLVGCGAGATPLVVRGTRLYLRRYWQYEQAVGAALDA
RLARSAALAATLPCAALRAALDALFPAAAGPVPMPAPDWQKLACALAARSAFAIVTGGPG
TGKTTTVVKLLALLQALALSAPASGGAPARALRIRLAAPTGKAAARLNEAIAGAVARLAL
DGLAQGEAVRAAIPTTVGTLHRLLGSRPDSRRFRHGARNPLALDVLVIDEASMIDLEMMT
AVLAALPPRSRLILLGDKDQLASVEAGAVLGELCAQAHRGRYTPATAAWLRAVSGQDVAA
ALVDPTGSALDQAVAMLRHSFRFAAGSGIGRLAAAVNAGAAEEVVQVLAASAGTQEALQW
IALDGEDDAVLRRLVIEGGTADRGPSAGAAPGDRGGARRRGYRHYLEEMRRRRPPHTAGA
AAIDAWARAVLQAHGEFQLLCALRRGPWGVEGLNARVARMLHAAGLIPAVDGWYAGRPVL
VTRNDYALGLMNGDIGITLAVPEPAAEGGMEGGMEGAVRLRVAFAAGDGSGGIRWVLPSR
LQAVETVYALTVHKSQGSEFTHTALVLPERLAPILTRELLYTGITRARGFLTLATAGGDA
LVAQAVHRRVVRASGLRGEGAMR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgccctgccgacgcctttcccggcgctccttccgctccccggcgctccggcg
ccggcggattccgcccgccaggcggccggcgaccctgccggcgacgcccgcggccggatg
caggcactgatcgcgcgctgggcgcagcgcggctggctgcgcccgctcgacgccgccttt
gccggcttcctgtggcgcgaagtgcccgatgccgatccgctgctggtgctcgccgcggcg
ctggccagccaccagctcggccgcggccatgtctgcctcgatctcgccgccaccctcgcc
gatcccgcgctcgccctctccctgccgcctgaagcggcggacggcgaggacgagggggcg
gacgacctgcccgcgcgtgtgcttgccgggctcgagctggcgcgctggcagcgcgcgctc
gacgatccgcgcctggtcggttgcggcgccggggcgacgccgctggtggtgcgcggcacg
cggctgtacctgcggcgctactggcagtacgagcaggcggtgggcgcggccctcgacgcg
cgcctcgcccgctctgcggcgctcgccgctacgctgccgtgcgcggcgttgcgtgcggcg
ctcgatgcgctctttcccgctgccgccgggcctgtgcccatgcccgcgcccgactggcag
aaactcgcctgtgcgctcgccgcgcgcagtgcgttcgcgatcgtcaccggcggtcccggc
accggcaagaccaccaccgtggtgaagctgctcgccctgctccaggcgctggccctgtcc
gcccccgcctccggcggcgcgccggcccgggcactgcgcatccgcctcgccgcgcccacc
ggcaaggccgccgcccgtctcaacgaagccattgccggcgccgttgcccgccttgcgctg
gacggcctggcgcagggcgaggcggtgcgcgcggcgattccgaccaccgtcggtaccctc
catcgcctgctcggcagccgcccggacagccgccgttttcgccatggcgcccgcaatccg
ctggcgctcgatgtgctggtgatcgacgaggcgtcgatgatcgacctcgagatgatgacc
gcggtgctcgcggccttgcccccgcgcagccgcctgatcctgctcggcgacaaggaccag
ctcgcctcggtggaagccggcgccgtgctcggcgagctgtgcgcgcaggcgcaccggggg
cgctacaccccggccacggccgcgtggctgcgggcggtgagcgggcaggacgtagccgcg
gcgctggtcgatcccaccggcagtgcgctcgaccaggcggtggccatgctccgccacagc
ttccgcttcgccgccggcagcggcatcggccggctcgccgcggcggtcaatgccggcgcc
gcggaagaggtcgtgcaggtgctggcggcatctgccggaacgcaggaggcactgcaatgg
atcgccctcgacggcgaggacgacgccgtgctccggcgcctcgtgatcgagggcggcacg
gccgaccgggggccgtccgcaggggcggcgccgggcgatcggggcggcgctcgacgccgt
ggctaccgccactacctggaggagatgcgccgccggcggccgccgcacacggcaggcgcc
gccgcgatcgacgcctgggcgcgcgcggtgctgcaggcgcacggcgaattccagctcctg
tgcgcactgcgccgcggcccctggggggtggaagggctcaatgcgcgcgttgcccggatg
ctgcacgcggccgggctgattcccgcggtcgacggctggtatgccgggcggccggtgctg
gtcacccgcaacgactatgcgctggggctgatgaacggtgacatcgggatcaccctggcg
gtacccgagccggccgcggagggcgggatggagggcgggatggagggggcggtgcgcttg
cgcgtcgccttcgccgcgggcgacggcagcggcggtatccgctgggtgctgccgagccgc
ctgcaggcggtggagacggtctatgcgctgacggtgcataaatcgcagggctcggagttc
acccacaccgccctggtgctgccggagcgcctcgcgccgatcctgacccgcgagctgctg
tacaccggcatcacccgcgcccgcggcttcctgaccctggccacggcgggcggggacgcg
ctcgtcgcccaggccgtgcaccgccgggtggtgcgcgcgagcgggctgcgcggggagggt
gcgatgcggtga
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