Thauera chlorobenzoica: Tchl_2016
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Entry
Tchl_2016 CDS
T04612
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tcl
Thauera chlorobenzoica
Pathway
tcl03420
Nucleotide excision repair
tcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tchl_2016
03430 Mismatch repair
Tchl_2016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcl03400
]
Tchl_2016
Enzymes [BR:
tcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tchl_2016
DNA repair and recombination proteins [BR:
tcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tchl_2016
MMR (mismatch excision repair)
Other MMR factors
Tchl_2016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_22
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
APR04862
UniProt:
A0A1H5SD44
LinkDB
All DBs
Position
2172021..2174252
Genome browser
AA seq
743 aa
AA seq
DB search
MSDLLANLNTEQLQAVTLPPQHALILAGAGSGKTRVLTTRIAWLVQSGQADPAGILAVTF
TNKAAKEMLARLSTMLPVSPRGMWIGTFHGLANRLLRAHHRDAGLPQLFQILDSADQLAA
IKRLLKTLNVDDEKFPPRELQHFINGQKEAGNRPHAVEAWDDYTRQRVQLYQEYEAQCQR
ESVVDFAELLLRSYELLERNEPLRCHYQRRFRHILVDEFQDTNRLQYRWLKLFADEGREG
GGALFCVGDDDQSIYRFRGAEVGNMRDFEREFRVANVIRLEQNYRSHSNILDAANAIIRH
NSNRLGKNLWTDQGAGEPIRIFEAYSDGDEARWIVDEIQQLVRDGALRSEIALLYRSNAQ
SRVLEHQLFSAGIAYRVYGGLRFFERQEIKHALAYLRLIANADDDTAFARVVNFPTRGIG
ARSLEVLQDAARTYNTSLYATVPHLTGKPGTSLAQFVRLVEDLRRDTAGLPLPELVDHVL
DASGLRAHYKAEKEGRERLENLDELINAAANFLAEAQAQRAPDEALPTHALLADFLAHAS
LEAGEHQADQGADAVQLMTVHSAKGLEFNAVFLSGLEEGLFPHENSTLESDGLEEERRLM
YVAVTRARERLYLSFAQSRMLHGQTRYNLRSRFLEEVPAGLTKWLTPPKPRSAAGGEFGA
MRGGAGGGYLKPLFAAQTPRAPRPSFAQLPNGLRIGQAVSHAKFGQGVIVAAEGSGNDAK
VQINFGPAGVKWLLLSVAKLEAA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgctcgccaatctcaacaccgaacaactccaggccgtgaccctgccgccc
cagcatgcgctgatccttgccggcgccggctcgggcaagacccgcgtgctcaccacccgc
atcgcctggctggtccagtccggccaggccgatccggccggcatcctggcggtgaccttc
accaacaaggccgccaaggagatgctcgctcgcctgtcgacgatgctgccggtgagcccc
cgcggcatgtggatcggcaccttccacggcctcgccaaccgcctgctgcgcgcccaccac
cgcgacgccggtctgccgcagctgttccagatcctcgattcggccgaccagctcgccgcg
atcaagcgcctactgaagacgctcaacgtcgatgacgaaaagttccctccgcgcgagctg
cagcacttcatcaacggccagaaggaggcgggcaaccgcccccatgcggtcgaagcctgg
gacgactacacccgccagcgtgtccagctctaccaggagtatgaagcgcagtgccagcgc
gagtctgttgtggattttgcggagttgctgctgcgcagctacgagctgctcgagcgcaac
gagccgctgcgctgccactaccagcgccgcttccgccacatcctggtcgacgagttccag
gacaccaaccgcctgcagtaccgctggctgaagctcttcgccgacgaggggcgcgagggc
ggcggagcgctgttctgcgtcggcgacgacgaccagagcatctaccgcttccgcggcgcc
gaggtcggcaacatgcgcgacttcgagcgcgagttccgcgtcgccaacgtgatccgcctg
gagcagaactaccgctcgcacagcaacatcctcgacgccgccaacgcgatcatccgccac
aacagcaaccgcctcggcaagaacctgtggaccgaccagggcgcgggcgagccgatccgc
atcttcgaggcctactccgacggcgacgaggcgcgctggatcgtcgacgagatccagcag
ctggtgcgcgacggcgcgctgagaagcgagattgcgctgctctaccgctcaaacgcgcag
tcgcgcgtgctcgagcaccagctgttctcggccggcattgcctatcgcgtgtatggcggg
ctgcgcttcttcgagcgccaggagatcaaacacgcgctcgcctacctgcgcctgatcgcc
aacgcggacgacgacaccgcctttgcccgcgtggtgaacttccccacccgcggtatcggt
gcgcgctcgctcgaagtgctgcaggacgccgcgcgcacctacaacaccagcctctacgcg
accgtgccgcacctcaccggcaagccgggcacgtcgctggcgcagttcgtccgcctggtc
gaggacctgcgccgcgacaccgccggcctgcccctgcccgagctggtcgaccacgtgctc
gacgccagcgggctgcgcgcccattacaaggccgagaaggaaggccgcgagcggctcgag
aacctcgacgagctgatcaacgccgccgccaacttcctcgccgaagcccaggctcagcgt
gcgcccgacgaggcgctgccaacgcatgcgctgctcgccgattttctcgcccacgcttcg
ctcgaggccggcgagcaccaggccgaccagggcgccgacgcggtgcagctgatgacggtg
cattcggccaagggcctggagttcaacgcggtgttcctgtccgggctggaggagggcctg
ttcccgcacgagaacagcaccctcgagagcgacggcctggaggaggagcgccggctgatg
tacgtcgcggtgacgcgggcgcgcgagcggctctacctgtccttcgcccagagccgcatg
ctgcacgggcagacgcgctacaacctgcgctcgcgctttctcgaggaggtgccggccggg
ctgaccaagtggctcaccccgcccaagccgcgtagcgccgccggcggcgagttcggcgcg
atgcggggcggtgcgggcggcggttatttgaagccgttattcgccgcgcagacgccgcgc
gcgccgcgaccgagcttcgcccagttgcccaacgggctgcgcatcggtcaggcggtgagc
catgcgaaattcggccaaggcgtcatcgtcgccgccgagggcagcgggaacgacgcgaaa
gtgcagatcaacttcggcccggccggggtgaagtggctgctgctgtcggtggccaagctc
gaggcggcctga
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integrated database retrieval system
