Thauera chlorobenzoica: Tchl_2228
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Entry
Tchl_2228 CDS
T04612
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Organism
tcl
Thauera chlorobenzoica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE
PAS
PAS_4
HATPase_c
PAS_9
PAS_3
Response_reg
PAS_8
HisKA
MASE1
Hpt
Diguanyl_cycl_sensor
PAS_11
HATPase_c_2
Receiver_CRE1
Motif
Other DBs
NCBI-ProteinID:
APR05068
UniProt:
A0A1L6FDS1
LinkDB
All DBs
Position
complement(2408838..2413223)
Genome browser
AA seq
1461 aa
AA seq
DB search
MKAALGRAPADTPISPIAHLRRCLIVALLYALAGGAAMVLPLSSGYASPVWPAAGVAVAA
LLIWGPRCWPGVWLSGLSTNLWFDPSAAGAGLAALIASAVTAQALLGAWLARRYFRNDLP
FAHDWRLGRVLIGAGPLACLLSASLSTAIRFFGGRLEEAALLDEWLRWWSGDTLGVLLFA
PLSLLLWPGAHPFRVLGGGSYRFALPLIVTTALLVLGHLGLAQLIDLRARSQTHALMEVI
SDNETQAIVETLLPLQGLAHFFTASREVTREEFREYAHSFLDHPAILSVDWAPRITAAQR
SGFEASMLAEGFETFRIAELDDQGELQPASRRAEYFPILYSEPFAVSRDVLGLDHGFDPL
RRQAMATARDNGIAVASDRIHLPRTGRHASLAYIPVWRQAGGERPQHPAGYVAGVVDIPQ
LFAPLVERARAQGLAVRITDITRDNPPHPLIDGLRSGASPDWRREFHFGSRTWRLEMQPD
SPPRLPGPSSEERLFLGFTLLTALLAAFATLSSTGRHALINREVSERTAQLRSELDARSA
AERALHLSEERYRQLIELSPLGILVQCDGRFMFVNTRTLAMFGARSADQLLGRALIDFVH
PDSRDIIRERTELRSKGLPAPNPTVIHYHRLDGSYSWAELSSVPYLHGGRLGSLILLNDI
SARIRAEEQHDRFFNLSLDLFCIASTDGHFKSVNPAFTRILGWSEEELLSRPMFDFVHPD
DIPATRHELQHLAHNNNSTLGFENRYRCKDGSWRWLSWKALPQPGQLLFATARDMTEQHR
AARQLTELNAELQQRIEERSRTLTELEAKKEEIRAVLDHLLECVITIDRHGTIRRVNPAI
EPLLGYTPAELLGRNVSCLMDSPHRDQHDGYLARYLQSGERHIIGSSREVTGRHKNGTAV
SLELSVSEYRIDGEHLFIGTLRDIRERRALIASLTQAREDAEQASRAKSAFLAAMSHEIR
TPMNGVIGLIDVLAQDDLNLQQADLVKTIRESAGNLLSIIDDILDFSKIEAGKLEIGQET
VDFPALLEEQGRTLIPLAEAKGVDLEVHVEAGMPRWIHADPLRLRQILCNLVGNAIKFSS
TERNPSAGRGRIHVRARVRAATPLQVVLEVEDNGIGISAAHQRNLFTPFTQAESSTTRRF
GGTGLGLAICKRLVDLMNGEIGVDSCPGRGSLFSVRLPLEPASPPASIDPTPPPAPSARG
DGRSHRILVAEDDAVNRKVIQHQLALLGHHCEIARNGVEALERWRDAPYDLLLTDLHMPE
MDGYQLAGCIRREENGERRIPILVLTANALRDEATRAKAAGMDEYLTKPIRLATLKAALE
RWLPHTTAAAEPAKITQPGAAAPVEEILLDTQALDTLVGGDRQMAAEVLHDYVESLDALA
IELEDSFGCGDHAAMGALAHRLKSSSRAVGAQRLAQLCSLLEQTAKAADSATLAHCTSEF
RSIHAATRRQIEQQLAGEQPA
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccgcactgggtagggcgccagccgacacgcccatctccccgattgcgcacctg
cgccgctgcctgatcgtcgccctcctctacgccctcgccgggggcgccgcgatggtactg
cccctttcctcggggtacgcctccccggtatggcccgccgctggggttgcggtcgccgcc
ctgctgatctgggggccgcgctgctggccgggggtctggctcagcgggctatcgaccaat
ctctggttcgatccttccgcggccggcgccggactcgcggcgctgatcgcgagcgcagtc
accgcccaggccctgctcggcgcctggctggcgcgccgctatttccgcaacgacctgccg
ttcgcccacgactggaggctgggccgcgtcctgatcggcgcaggaccgctggcctgcctc
ctttccgcctcattgagcaccgccatccgcttcttcggtggccggctcgaggaggccgcg
ctgctcgacgaatggctgcgctggtggtcgggagacaccctcggcgtgctgctgttcgcc
ccgctgagcctgctgctgtggccgggcgcccaccccttccgggtgcttggcggcggcagc
taccgcttcgccctgccgctgatcgtcaccaccgcgctgctggtgctcggccatctcggt
ctggcgcaactcatagacctgcgcgcgcgcagccagacccacgccctgatggaagtcatc
agcgacaatgaaacccaggccatcgtcgaaacgctgctgccgctccagggactggcccac
ttcttcaccgccagccgtgaagtcacgcgcgaagaattccgcgaatacgcccacagcttt
ctcgatcacccggcgatcctttcggtggactgggcgccgcgcatcaccgccgcccagcgc
agcggcttcgaagcatcgatgctcgccgaaggcttcgagaccttccgcatcgccgaactg
gacgatcagggagaactccagcccgccagtcgccgcgccgaatactttccgatcctgtac
agcgagccgttcgccgtcagccgcgacgtcctcggcctcgaccacggcttcgatccgtta
cgccgccaggcaatggccaccgcccgcgacaacggcatcgccgtcgcctccgaccggatt
catctgccgcgcaccgggcgccacgcctcgctggcctacatcccggtgtggcgacaggcc
ggcggcgaacggccgcagcaccccgccggctacgtggccggcgtcgtcgacatcccgcag
ctgttcgccccgctggtcgaacgcgcccgcgcacaaggcctcgccgtgcgcatcaccgac
attacccgggacaacccgccacacccgctgatcgacggcctgcgcagcggcgccagcccc
gactggcggcgcgagttccacttcggcagccgcacctggcgcctggaaatgcagcccgac
agcccgccccgcctgcccggcccgagcagcgaggagcgtctcttcctcggcttcaccctg
ctcaccgcgctgctcgcggccttcgccaccctcagcagtaccggccgccacgcccttatc
aaccgcgaggtcagcgagcgcaccgctcagctgcgcagcgaactcgacgcccgctcggcg
gccgagcgcgccctgcatctgagcgaagaacgctaccgccagctgatcgagctctcgccc
cttggcatcctggtgcagtgcgatggccgcttcatgttcgtcaacacccgcaccctggcg
atgttcggcgcccgttccgccgatcagctgctgggccgcgccctcatcgatttcgttcac
cccgacagccgcgacatcattcgcgagcgcaccgaactgcgcagcaaagggctgcccgct
cccaacccgacggtgatccactatcaccgcctggacggctcctattcctgggccgagctc
agctcggtgccttacctgcacggcgggcgcctcggctcgctgatcctgctcaacgacatc
agcgcgcgcatccgtgccgaagagcagcacgaccgcttcttcaacctctccctcgacctg
ttctgcatcgcctccaccgacggccatttcaagagcgtcaaccccgccttcacccggatc
ctgggctggagcgaggaggaactgctcagtcgcccgatgttcgacttcgtccatcccgac
gacattcccgccacccgccacgagctgcagcacctggcgcataacaacaacagcacgctg
ggcttcgagaaccgctaccgctgcaaggacggctcctggcgctggctgagctggaaggcc
ctgccccagccgggccagctgctgttcgccaccgcgcgggacatgaccgagcagcaccgc
gccgcgcggcagctcaccgagctcaatgccgagctgcagcagcgcatcgaggagcgcagc
cggaccctgaccgagctggaagccaaaaaggaggaaatccgcgcggttctcgatcacctg
ctcgaatgcgtgatcaccatcgaccgccacggcaccatccgtcgcgtcaacccggcgatc
gagccgctgctcggctacacccccgcggaactgctcgggcgcaacgtctcctgcctgatg
gacagtccccaccgtgaccagcatgacggctacctggcacgctacctgcagagcggcgaa
cgccacatcatcggctccagccgcgaagtgaccgggcgccacaagaacggcacggcggtc
agcctggagctgagcgtgtccgagtaccgcatcgacggcgagcacctgttcatcggcacc
ttgcgcgacatccgcgagcgccgggcgctgatcgccagtctcacccaggcccgcgaggac
gccgagcaggccagccgcgccaagtcggccttcctcgccgccatgagccacgagatccgc
acgccgatgaacggcgtgatcggcctgatcgacgtgctcgcccaggatgatctgaacctc
cagcaggccgatctggtgaagaccatccgcgagtcggcgggcaatctgctcagcatcatc
gacgacatcctcgacttctcgaagatcgaagccggcaagctggagatcggtcaggagacg
gtcgatttccccgccctgctggaagagcagggccgcaccctgataccgctcgccgaggcc
aaaggcgtcgatctcgaggtacacgtggaagccgggatgccacggtggatccacgccgac
ccgctgcgcctgcggcagatcctctgcaacctggtcggcaacgcgatcaagttctcttcc
accgaacgcaaccccagcgccggccgcggccgaatccacgtgcgcgcccgggtgcgggcc
gccactccgctgcaggtggtcctcgaagtcgaggacaacggcatcggcatcagcgcagcg
catcagcgcaatctgttcaccccctttacccaggccgaaagctcgaccacccgccgcttc
ggcggcaccggcctgggcctggcgatctgcaagcgcctggtcgacctgatgaatggcgaa
atcggcgtcgacagttgcccggggcgagggtcgctattcagcgtccgcctgccgctggag
ccggccagccccccggccagcatcgaccctacgccaccaccagccccgtcggcacggggc
gacggacgcagccaccgcatcctggtcgccgaagacgatgcggtgaaccgcaaggtaatc
cagcaccagctggccttgctcggccatcactgcgagattgcccgcaacggcgtcgaagcc
ctggagaggtggcgtgatgcaccctacgacctgctgctgaccgacctgcacatgccggag
atggacggctaccagctcgccgggtgcatccgccgcgaggaaaacggcgagcggcgcatc
ccgatcctggtcctcaccgcgaatgccttgcgcgatgaagccacacgagccaaagcggcc
ggaatggacgaatacctgaccaagccaatccggcttgccacgctgaaagcggcactcgag
cgctggctgccgcacacgaccgccgccgccgaacccgccaagatcactcaacccggcgcc
gccgcaccggtcgaggagatcctgctcgatacgcaggcgctggacaccctggtcgggggc
gaccggcagatggccgccgaagtccttcacgactatgtcgaatcgctcgatgcactggcc
atcgaactcgaagacagcttcggatgcggggaccacgccgccatgggcgccctcgcccat
cgcctgaagtcgtcttcccgggccgtcggtgcccaacgcctggcgcagctgtgcagcctg
ctggaacagaccgcaaaagcggccgatagcgccaccctggcgcactgcaccagcgaattc
cgcagcatccacgccgccacgcgacgacaaatagaacagcagctggccggcgaacaaccg
gcctga
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