Thauera chlorobenzoica: Tchl_2267
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Entry
Tchl_2267 CDS
T04612
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tcl
Thauera chlorobenzoica
Pathway
tcl03410
Base excision repair
tcl03430
Mismatch repair
tcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tchl_2267
03430 Mismatch repair
Tchl_2267
03440 Homologous recombination
Tchl_2267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcl03400
]
Tchl_2267
DNA repair and recombination proteins [BR:
tcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Tchl_2267
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tchl_2267
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Tchl_2267
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
APR05107
UniProt:
A0A1H5RW06
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All DBs
Position
complement(2457543..2459255)
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AA seq
570 aa
AA seq
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MSLTLRIQPRAVPQRAFDRLADAGLHPLLARLYAARGITRADELDTALKNLLPPEALRGT
REAAQLLADAIEAGARLVIVADYDCDGATACAVGMRALRAFGADVHYLVPDRITLGYGLT
PAMVEIAARLEPDVLITVDNGIASVEGIAAARAHGMATVITDHHLPGDVLPEADVIVNPN
QPGCDFPSKALAGVGAMFYTMLALRAELRERGAFAGGKEPNLAALLDLVALGTVADVVKL
DRNNRILVAQGLARMRAGRLQPGIRALFALAGRDPARASTTDLGFMIGPRLNAAGRLSDM
SLGIECLVTDDPGRAMNIAQELDRLNRERRTIEAGMQEEALARLAGFDADAGAGGRATIA
LFEPDWHQGVIGIVAGRIKERLHRPTIAFARAADGELKGSGRSIPGLHLRDALDLVTKRH
PDLILRFGGHAMAAGLSIRESELANFDAAFEEVVGELIAPADLQRRVDTDGNLESGYFAL
DAVRMLEAEIWGQDFPAPLFDDVFRVERQRLLKNRHLKLELSRNGIRHEAIRFNHADGAA
AQIHAAYKLGINEYNGVSSVQLLLEHFEPA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaccctccgcatccagccccgcgccgtgccacagcgtgccttcgaccgcctc
gccgacgccggcctgcatccgctgctcgcccgcctctacgccgcgcgcggcatcacccgc
gccgacgaactcgacaccgcgctgaagaacctgctgccgcccgaggccctcagaggcacc
cgcgaagcggcgcagctgctcgccgacgccatcgaggccggcgcgcgcctggtcatcgtc
gccgattacgactgcgacggcgccaccgcctgcgcggtgggcatgcgcgcgctgcgcgcc
ttcggcgccgacgtgcactacctggtgcccgaccgcatcacccttggctacggcctcacg
ccggcgatggtggagattgccgcgcggctcgagcccgacgtgctcatcaccgtcgacaac
ggcatcgccagcgtcgaaggcatcgccgccgcgcgcgcccacggcatggccacggtgatc
accgaccaccacctccccggcgacgtcctccccgaggccgacgtcatcgtcaatccgaac
cagcccggctgcgacttcccgagcaaggcgctggccggcgtcggcgcgatgttctacacc
atgctcgcgctgcgcgccgagctgcgcgagcgcggggcgtttgccggcggcaaggagccc
aacctcgccgcgctgctcgacctggtcgcgctcggcactgtcgccgacgtcgtcaagctc
gaccgcaacaaccgcatcctcgtcgcccagggcctcgcgcgcatgcgcgccggccgtctg
cagcccggcatccgcgccctgttcgcgctcgccgggcgcgacccggcgcgcgccagcacg
accgacctcggcttcatgatcggcccgcgcctgaacgccgccgggcggctgtcggacatg
agcctggggatcgaatgcctggtcaccgacgaccccgggcgggcgatgaacatcgcccag
gagctcgaccgcctcaaccgcgagcgccgcacgatcgaagccggcatgcaggaagaggcg
ctcgcgcggctggccggcttcgacgctgatgcgggtgccggtggccgcgccacgatcgcg
ctgttcgagcccgactggcaccagggcgtgatcggcatcgttgccggccgcatcaaggaa
cgcctgcaccggccgacgatcgccttcgcccgcgccgccgacggcgagctcaagggttcc
gggcgctcgattcccggcctccacctgcgcgacgcgctcgacctggtgaccaagcgccac
cccgacctcatcctgcgtttcggtggccacgccatggccgccggactgagcatccgcgag
agcgagctggcgaacttcgacgccgccttcgaggaggtcgtcggcgagctgatcgccccc
gccgacctgcagcgccgcgtcgacaccgacggcaacctcgagtccggctatttcgccctc
gatgcggtgcgcatgctggaagcggaaatctggggccaggacttccctgccccactgttc
gacgatgttttccgcgtcgagcgccagcgcctgctcaagaaccgtcacctgaagctcgag
ctgtcgcgcaacggcatccgccatgaggcgatccgcttcaaccacgccgacggcgccgcc
gcccagatccacgccgcctacaagctcggcatcaacgagtacaacggcgtcagcagcgtg
cagctgctgctggagcacttcgagccggcctga
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