Thauera chlorobenzoica: Tchl_3172
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Entry
Tchl_3172 CDS
T04612
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tcl
Thauera chlorobenzoica
Pathway
tcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tchl_3172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcl03400
]
Tchl_3172
Enzymes [BR:
tcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Tchl_3172
DNA repair and recombination proteins [BR:
tcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tchl_3172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
DUF2867
Motif
Other DBs
NCBI-ProteinID:
APR05979
UniProt:
A0A1H5YHF3
LinkDB
All DBs
Position
complement(3424558..3425451)
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AA seq
297 aa
AA seq
DB search
MALRCEIALPRDFHPADVLAFHRRDPQQLAERVEAGLLRKGIAWEGRPACLTIRFEAQRA
ELVLAIDGLPTPTLATAVLERLARRMLGLMQPVAEFEHTHARHPQLGPLIARNRGLRVPL
APTPFEALSWAITGQQISLSAAVSLRRRLIAAAGLRHSGGLACYPDARSLLRLGEETLRA
AGFSRAKGQALRALADAVMQGRLPLERWVEDPPADEIRTELLRLRGIGPWTVDYALLRGF
GWVDGSLHGDAAVRRGLQALLGTAERPSADQTRCWLAPFSPWRALVAAHLWTLAAPA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcgctgcgagatcgcgctgccgcgggactttcaccccgccgacgtgctcgcc
ttccaccgccgcgatccgcagcaactggctgagcgcgtcgaagccggcctgctgcgcaag
ggcatcgcctgggaagggcggcccgcctgcctgacgattcgtttcgaggcgcagcgggca
gagctcgtgctcgccattgacggcctgccgacgccgacgcttgcgacagcggtgctggag
cggcttgcccggcgcatgctcgggctgatgcagccggtcgccgagttcgaacatacccat
gcccgtcatccgcagctcggccccttgatcgcgcgcaaccgcggcctgcgcgtgccgctt
gcgccgacgccgttcgaggccttgagctgggcgatcaccggccagcagatcagcctcagt
gcggcggtgtcgctgcgtcgccgcctgatcgcggctgcgggcctgcgccattcgggtgga
ctcgcctgctatcccgacgcccgcagcctgctgcggctgggcgaggagacgctgcgcgcc
gccggtttttcgcgggccaaggggcaggcgctgcgtgcgctggccgacgccgtgatgcag
gggcggctgccgctcgagcgctgggtggaagacccgccggcggacgagatccgtaccgag
ttgctgcgcctgcgcggcatcgggccatggacggtcgattacgcgctgctgcgcggtttc
ggctgggtcgacggctcgctgcacggcgatgccgcggtgcgccgtggtctgcaggcgctg
ctcggcacggcggagcgcccgagcgcggatcagacccggtgctggcttgcgcctttcagc
ccgtggcgggcgctggtcgccgcccacctgtggacgctggcggcgcccgcctga
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