Thauera chlorobenzoica: Tchl_3386
Help
Entry
Tchl_3386 CDS
T04612
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tcl
Thauera chlorobenzoica
Brite
KEGG Orthology (KO) [BR:
tcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcl03009
]
Tchl_3386
Enzymes [BR:
tcl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Tchl_3386
Ribosome biogenesis [BR:
tcl03009
]
Prokaryotic type
ribosomal protein modification factors
Tchl_3386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
RNase_II_C_S1
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
APR06186
UniProt:
A0A1H5YUL0
LinkDB
All DBs
Position
complement(3644111..3645442)
Genome browser
AA seq
443 aa
AA seq
DB search
MTTLKTPELPRVGMVSLGCPKATVDSEHLLTRLRAEGYSISGSYDDADLVVVNTCGFIDA
AVEESLDAIGEALAENGKVIVTGCLGAKDDVVLASHPQVLAVTGPHATEEVMHAVHKFLP
KPHDPFTDLVPPQGIRLTPQHYAYLKISEGCNHRCSFCIIPSMRGDLLSRPIHEVMREAE
ALADAGVKEILVISQDTSAYGVDIKYRTGFWGGRPVKTRLVDLARALGELGIWIRMHYVY
PYPSVDELIPLMAEGRILPYLDVPFQHASPRILKAMKRPANAENVLERVRKWRSICPDLT
IRSTFITGFPGETEEDFEMLLNFLEQAQLDRVGAFAYSPVEGATANDLPGAVPDDIREER
RARLMDFQEDISTQRLEAKIDREMTVLVDEVDEEGALARSPGDAPEVDGLVIIPDGEGLA
PGDFVRVRITDCDVHDLYAERLD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttgaagactccggaactgccgcgcgtcggcatggtgtcgctcggctgccca
aaggcaaccgtggactccgagcacctcctgacccggctgcgcgccgaaggctactcgatt
tccggcagctacgacgacgccgacctggtggtggtgaatacctgcggcttcatcgatgcg
gcggtcgaggagtcgctcgatgcgatcggcgaggcgctggccgagaacggcaaggtgatc
gtcaccggctgccttggtgccaaggacgatgtcgtcctcgcctcccatccacaggtgctg
gccgtgaccggcccgcatgccaccgaggaggtgatgcatgccgtgcacaagtttcttcct
aagccccacgatccgttcaccgatctggtgccgccgcaaggcatccgcctgacgccgcag
cattacgcgtacctgaagatttccgaaggctgcaatcaccgctgctccttctgcatcatt
ccgtcgatgcggggcgatctgctcagccggccgatccacgaggtgatgcgcgaggccgag
gctctggccgatgctggggtgaaggagatcctggtgatttcgcaggacacgtccgcttac
ggcgtcgatatcaagtatcgcaccggtttctggggcggacggccggtgaagacccgcctg
gtggacctggccagggccctgggcgagctcgggatctggattcgcatgcactacgtgtac
ccctatccgagcgtagatgagctgattccgctgatggccgaggggcgcatcctgccgtac
ctggacgtgcctttccagcatgccagtccgcgcatcctgaaggcgatgaagcggccggcg
aatgccgagaacgtgctcgagcgtgtgcgcaagtggcgcagcatctgccccgatctgacc
atccgctcgaccttcatcaccggcttcccgggggagaccgaggaagacttcgaaatgctg
ctgaacttcctggagcaggcccagctcgatcgcgtcggcgcgtttgcctattcgccggtg
gaaggggcgacagcgaacgatctgcccggcgccgtccccgacgatatccgcgaggagcgg
cgggcgcggctgatggatttccaggaggatatttccacccagcgcctcgaggcgaagatc
gaccgcgagatgaccgtgctcgtggatgaagtcgacgaagagggggcgctcgcacgttcg
ccgggggatgcgccggaagtcgatgggctggtgatcatcccggatggcgaaggcttggcg
ccgggcgatttcgtccgggtgcggatcaccgactgtgacgtccatgacctttacgccgaa
cgcctggactga
DBGET
integrated database retrieval system
