Thermodesulfobacterium commune: HL41_01870
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Entry
HL41_01870 CDS
T03212
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
tcm
Thermodesulfobacterium commune
Pathway
tcm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tcm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HL41_01870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcm03021
]
HL41_01870
Transcription machinery [BR:
tcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HL41_01870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r1_1
UPF0227
DUF7167
Motif
Other DBs
NCBI-ProteinID:
AIH03659
UniProt:
A0A075WQS4
LinkDB
All DBs
Position
350733..352076
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AA seq
447 aa
AA seq
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MAQKDLNEKILELGKAGQLTYEMLNKILPEEYNDPDKIEEIFDLLESYGIELKDMDPYER
EEYIEKKVHDKIRELSTFAEGELTEEETISEPGSEELLSLYLKEMGKYDLLTPEREEELS
REIREGFDNILKIIRETQIDCKEILEVKAVVQEWERRDPNLKPKKTYVNYLEKVVKELEE
RYIKNKKHKVEPKGIKEFCTEIKKNIARIEKAKDEMVKANLRLVVSIAKKYVRQGLSLAD
LIQEGNLGLMRAVYRFDYRKGNKFSTYASWWIRQSITRAILDKTRTIRLPVHFLELRNYV
FKVFYELSKELGREPTPEELSQRTGVPYEKILVIFETSKEPVSLETPIGDEDSTLGNFIE
NKKSPSPYDTARKKDISEKIKRFLATLSPREEKIIRMRFGLGEYEGYTLEEIGYMFKVSR
ERIRQIEKKALYKMRQLAQKEKFDIRD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaaggaccttaacgaaaagattttagagttagggaaagcagggcagcttact
tatgaaatgttaaacaagattttacctgaagagtataacgaccctgataagattgaagag
atttttgaccttcttgagagttatgggatagagttaaaagacatggatccttacgaaaga
gaagagtatatagaaaagaaagtccatgataagattagagagctttctacttttgccgaa
ggagaattgactgaagaagaaactatctcagagccaggttcagaggagctattatctctt
tatcttaaagagatgggtaagtatgaccttttaaccccagaaagagaggaggagttgtca
agagagataagagaggggtttgataatatattaaagattataagagaaactcagatagac
tgtaaagagattttagaggtaaaagcggtggttcaggaatgggagcgaagagaccctaat
cttaaacctaaaaagacttacgttaactatctggaaaaggttgttaaggaattagaagaa
cgatatataaaaaataagaaacacaaggtagagcctaaaggtataaaagagttttgtact
gaaataaagaagaacatcgctcgtatagaaaaggctaaagatgagatggtaaaagctaat
cttaggttggtagtatctatagctaaaaagtatgtaagacaggggttgtctttggctgac
cttattcaggaaggaaaccttggtttgatgagggcagtctatcgttttgattatagaaaa
ggtaataagtttagcacttatgcttcttggtggataaggcagtctatcactagagctatt
cttgataagacaagaactataaggcttccagtacattttttagagctgagaaactatgtt
tttaaggttttttatgagctttctaaagagttaggaagggagcccactcctgaagagctt
tctcaaagaactggagtaccttatgaaaaaattttggtaatttttgaaacctcaaaagaa
cctgtctcgttagaaactccgattggagatgaagacagcaccttagggaattttatagaa
aataaaaaaagcccatctccttatgatacagccagaaaaaaggatatttcagagaaaata
aaaaggtttttagccaccctttctcctagagaagaaaaaattattcgcatgaggtttggt
cttggagaatatgagggatatactttagaagagatagggtatatgtttaaggtctcaagg
gaaaggattagacagatagagaaaaaagccctttataaaatgaggcagcttgctcaaaaa
gaaaaatttgacatcagagattaa
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