KEGG   Thermodesulfobacterium commune: HL41_01870
Entry
HL41_01870        CDS       T03212                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
tcm  Thermodesulfobacterium commune
Pathway
tcm02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tcm00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HL41_01870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcm03021]
    HL41_01870
Transcription machinery [BR:tcm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HL41_01870
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 Sigma70_r1_1 UPF0227 DUF7167
Other DBs
NCBI-ProteinID: AIH03659
UniProt: A0A075WQS4
LinkDB
Position
350733..352076
AA seq 447 aa
MAQKDLNEKILELGKAGQLTYEMLNKILPEEYNDPDKIEEIFDLLESYGIELKDMDPYER
EEYIEKKVHDKIRELSTFAEGELTEEETISEPGSEELLSLYLKEMGKYDLLTPEREEELS
REIREGFDNILKIIRETQIDCKEILEVKAVVQEWERRDPNLKPKKTYVNYLEKVVKELEE
RYIKNKKHKVEPKGIKEFCTEIKKNIARIEKAKDEMVKANLRLVVSIAKKYVRQGLSLAD
LIQEGNLGLMRAVYRFDYRKGNKFSTYASWWIRQSITRAILDKTRTIRLPVHFLELRNYV
FKVFYELSKELGREPTPEELSQRTGVPYEKILVIFETSKEPVSLETPIGDEDSTLGNFIE
NKKSPSPYDTARKKDISEKIKRFLATLSPREEKIIRMRFGLGEYEGYTLEEIGYMFKVSR
ERIRQIEKKALYKMRQLAQKEKFDIRD
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggcacaaaaggaccttaacgaaaagattttagagttagggaaagcagggcagcttact
tatgaaatgttaaacaagattttacctgaagagtataacgaccctgataagattgaagag
atttttgaccttcttgagagttatgggatagagttaaaagacatggatccttacgaaaga
gaagagtatatagaaaagaaagtccatgataagattagagagctttctacttttgccgaa
ggagaattgactgaagaagaaactatctcagagccaggttcagaggagctattatctctt
tatcttaaagagatgggtaagtatgaccttttaaccccagaaagagaggaggagttgtca
agagagataagagaggggtttgataatatattaaagattataagagaaactcagatagac
tgtaaagagattttagaggtaaaagcggtggttcaggaatgggagcgaagagaccctaat
cttaaacctaaaaagacttacgttaactatctggaaaaggttgttaaggaattagaagaa
cgatatataaaaaataagaaacacaaggtagagcctaaaggtataaaagagttttgtact
gaaataaagaagaacatcgctcgtatagaaaaggctaaagatgagatggtaaaagctaat
cttaggttggtagtatctatagctaaaaagtatgtaagacaggggttgtctttggctgac
cttattcaggaaggaaaccttggtttgatgagggcagtctatcgttttgattatagaaaa
ggtaataagtttagcacttatgcttcttggtggataaggcagtctatcactagagctatt
cttgataagacaagaactataaggcttccagtacattttttagagctgagaaactatgtt
tttaaggttttttatgagctttctaaagagttaggaagggagcccactcctgaagagctt
tctcaaagaactggagtaccttatgaaaaaattttggtaatttttgaaacctcaaaagaa
cctgtctcgttagaaactccgattggagatgaagacagcaccttagggaattttatagaa
aataaaaaaagcccatctccttatgatacagccagaaaaaaggatatttcagagaaaata
aaaaggtttttagccaccctttctcctagagaagaaaaaattattcgcatgaggtttggt
cttggagaatatgagggatatactttagaagagatagggtatatgtttaaggtctcaagg
gaaaggattagacagatagagaaaaaagccctttataaaatgaggcagcttgctcaaaaa
gaaaaatttgacatcagagattaa

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