Thermodesulfobacterium commune: HL41_02590
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Entry
HL41_02590 CDS
T03212
Name
(GenBank) hypothetical protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
tcm
Thermodesulfobacterium commune
Pathway
tcm02020
Two-component system
tcm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HL41_02590
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HL41_02590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcm03021
]
HL41_02590
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tcm02035
]
HL41_02590
Transcription machinery [BR:
tcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HL41_02590
Bacterial motility proteins [BR:
tcm02035
]
Flagellar system
Flagellar assembly proteins
Stator
HL41_02590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
GerE
PhyR_sigma-like
SieB
UPF0122
HTH_38
HTH_69
CLZ
DUF4315
NPV_P10
DUF1492
HTH_37
Tweety
P22_Tail-4
HTH_Mga
Phage_antitermQ
DUF7745
Motif
Other DBs
NCBI-ProteinID:
AIH03771
UniProt:
A0A075WSD3
LinkDB
All DBs
Position
complement(488588..489337)
Genome browser
AA seq
249 aa
AA seq
DB search
MVTKIINKVLFQKPPLEKVIEEFLPTINYWANRYSFQGQPVISKEDLVSAGVIGLIEAYH
RYDPTKKVKFRTFAEFRIKGAMLDEIRKIDIIPRSIRDKISELENKVKDLYKDLGRMPEE
TEIAEAMNLSLDEYHKLLENIKGITFIDIQSFKQRIPDLEEEDIFEFIGDNKEDPFEKYS
LKELQEELEKALEHLTEKERLVLALYYYEGLTMKEIAKVLECTESRVSQLHNQAIIKLRS
ILNQPKRGG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggttactaagattattaataaagtactttttcaaaagcctcctttagaaaaggtgata
gaagagtttttaccaactatcaactactgggctaatagatattcttttcaagggcagcct
gtaattagtaaagaagatttggtgtctgcaggagttataggtttaatagaggcttatcat
cgatatgatcctaccaaaaaagttaaatttagaacctttgctgagtttagaattaaaggt
gcgatgcttgatgaaattcgaaaaatagatataataccaagaagtataagggataaaatt
tctgaattagaaaataaagtaaaagatttatataaagatttaggaagaatgccagaagaa
acagagattgctgaggctatgaatttaagtttagacgaatatcataagcttttagaaaac
attaaaggaattacttttatagacattcaaagttttaaacagagaattcctgatttagaa
gaagaggacatttttgagtttataggagataataaagaagacccttttgaaaaatattcc
ttaaaagaattacaggaggagcttgaaaaggctttagaacatcttaccgaaaaggagcgt
ttagttttggctctttattactatgaaggacttacgatgaaagaaattgcaaaagttttg
gagtgtacagaaagtagagtttctcaacttcacaaccaagctatcataaaacttagaagt
attttaaaccaacctaagagaggagggtaa
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integrated database retrieval system