KEGG   Thermodesulfobacterium commune: HL41_02590
Entry
HL41_02590        CDS       T03212                                 
Name
(GenBank) hypothetical protein
  KO
K02405  RNA polymerase sigma factor FliA
Organism
tcm  Thermodesulfobacterium commune
Pathway
tcm02020  Two-component system
tcm02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tcm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HL41_02590
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HL41_02590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcm03021]
    HL41_02590
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:tcm02035]
    HL41_02590
Transcription machinery [BR:tcm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HL41_02590
Bacterial motility proteins [BR:tcm02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    HL41_02590
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 Sigma70_ECF GerE PhyR_sigma-like SieB UPF0122 HTH_38 HTH_69 CLZ DUF4315 NPV_P10 DUF1492 HTH_37 Tweety P22_Tail-4 HTH_Mga Phage_antitermQ DUF7745
Other DBs
NCBI-ProteinID: AIH03771
UniProt: A0A075WSD3
LinkDB
Position
complement(488588..489337)
AA seq 249 aa
MVTKIINKVLFQKPPLEKVIEEFLPTINYWANRYSFQGQPVISKEDLVSAGVIGLIEAYH
RYDPTKKVKFRTFAEFRIKGAMLDEIRKIDIIPRSIRDKISELENKVKDLYKDLGRMPEE
TEIAEAMNLSLDEYHKLLENIKGITFIDIQSFKQRIPDLEEEDIFEFIGDNKEDPFEKYS
LKELQEELEKALEHLTEKERLVLALYYYEGLTMKEIAKVLECTESRVSQLHNQAIIKLRS
ILNQPKRGG
NT seq 750 nt   +upstreamnt  +downstreamnt
atggttactaagattattaataaagtactttttcaaaagcctcctttagaaaaggtgata
gaagagtttttaccaactatcaactactgggctaatagatattcttttcaagggcagcct
gtaattagtaaagaagatttggtgtctgcaggagttataggtttaatagaggcttatcat
cgatatgatcctaccaaaaaagttaaatttagaacctttgctgagtttagaattaaaggt
gcgatgcttgatgaaattcgaaaaatagatataataccaagaagtataagggataaaatt
tctgaattagaaaataaagtaaaagatttatataaagatttaggaagaatgccagaagaa
acagagattgctgaggctatgaatttaagtttagacgaatatcataagcttttagaaaac
attaaaggaattacttttatagacattcaaagttttaaacagagaattcctgatttagaa
gaagaggacatttttgagtttataggagataataaagaagacccttttgaaaaatattcc
ttaaaagaattacaggaggagcttgaaaaggctttagaacatcttaccgaaaaggagcgt
ttagttttggctctttattactatgaaggacttacgatgaaagaaattgcaaaagttttg
gagtgtacagaaagtagagtttctcaacttcacaaccaagctatcataaaacttagaagt
attttaaaccaacctaagagaggagggtaa

DBGET integrated database retrieval system