Thermodesulfobacterium commune: HL41_03730
Help
Entry
HL41_03730 CDS
T03212
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tcm
Thermodesulfobacterium commune
Pathway
tcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HL41_03730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcm03019
]
HL41_03730
03009 Ribosome biogenesis [BR:
tcm03009
]
HL41_03730
Enzymes [BR:
tcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HL41_03730
Messenger RNA biogenesis [BR:
tcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HL41_03730
Ribosome biogenesis [BR:
tcm03009
]
Prokaryotic type
rRNA helicases
HL41_03730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
P-loop_SecA
Flavi_DEAD
HEM4
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AIH03958
UniProt:
A0A075WU86
LinkDB
All DBs
Position
complement(718120..719232)
Genome browser
AA seq
370 aa
AA seq
DB search
MLTFQSFNLSKKTLEALDIMGYKDPTDIQKKAIPFILAGEDLVGQAQTGTGKTAAFGIPI
VEKVEFKKKELQALILVPTRELAIQVSEEIRNIGKNKRIFVLTFYGGKPLKKQIELLQKR
VGKVLVGTPGRIKDLINRGYLKLDGIKMLVLDEADRMLDMGFIDDIDYIISQTPKERQTL
LFSATLPKEILILAEKYLRDGYKTIKIKPEEITLKQITQEVYKVPSHMKFEKLTAILSIW
QEPKIIIFVQTKLEAEELAKALREEGYSVKAIHGDYPQKKREMVMRGFKAGEFKILVATD
VASRGLDIKDVGLVINYGLPKDAESYIHRIGRTGRAGQTGTAISLMSRSEEKFLRNIMFK
TKVKPMVKSI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgttaacttttcaaagttttaacctttctaagaaaacgcttgaggcgttagacattatg
ggttataaagaccctacagacattcaaaaaaaggctataccttttattttagcaggagag
gatttagtaggtcaggctcaaactggtacaggcaaaactgccgcttttggaattcctatc
gtagagaaggtagagtttaaaaagaaggaacttcaagccttaatccttgtccctaccaga
gagcttgccattcaggttagtgaagaaataagaaacataggaaagaataagaggattttt
gtgcttaccttttatggagggaaacctttaaaaaaacagatagaacttttacaaaaaagg
gtagggaaggttttagtaggtactcccggaaggattaaagaccttatcaatagaggatat
cttaagcttgatggtataaagatgttagtcttagatgaggcagataggatgcttgacatg
ggttttatagacgatatcgattacataatttctcaaacccctaaggaaagacaaaccctt
cttttttctgccaccttacctaaggaaattttgattttagcagaaaaataccttagagat
ggttataaaaccataaaaattaaacctgaagagattacgttaaaacagataacccaagag
gtttacaaagtgccttctcatatgaagtttgaaaaactaacggcaattttatctatctgg
caagaacctaagatcattatttttgtgcaaactaagttagaggcagaagagttagccaaa
gctttaagggaagagggctactcagtaaaagctatacatggagattatccgcagaaaaaa
agagagatggtgatgaggggttttaaggcaggagaatttaaaattttagtagcaaccgac
gtagcctcgaggggtttagacattaaagatgttggattggtaatcaactatggactgcct
aaggatgccgaatcttatatccatcgtataggcagaaccggaagggctggtcaaactggt
acggctatctctttgatgagtaggtctgaagagaagtttttaagaaatatcatgtttaaa
actaaagtcaaacctatggtcaaatccatataa
DBGET
integrated database retrieval system
