KEGG   Thermodesulfobacterium commune: HL41_04220
Entry
HL41_04220        CDS       T03212                                 
Name
(GenBank) hypothetical protein
  KO
K03086  RNA polymerase primary sigma factor
Organism
tcm  Thermodesulfobacterium commune
Pathway
tcm02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tcm00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HL41_04220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcm03021]
    HL41_04220
Transcription machinery [BR:tcm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HL41_04220
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AIH04039
UniProt: A0A075WRV9
LinkDB
Position
complement(812928..814472)
AA seq 514 aa
MSLRNKKTFCLFEEEEMLLEEVSSENFWLPEEEEKRSGVKDEDPIKIYFKEVFSHKLLTK
EDEIRIGRTIEEKEREILSEVLSYYATTAKFFHLVIQSERHGKLGLLFKDCDELQKHKEK
FEHWIQSLKQSLSDILESFNSHGVNPELLEKTIELIYQVRPSKLLLDELCCEILETYQRV
NNLNRLKNKLQTKYEIKPITIEKIFSVNGRQINFLRLAKRFSIDKIDLDKLVKEVNEHCK
FMKHFDEFFGEPLEKVYQSGEKIFKACQVIKACKEELVKSNLRLIISIARKYSPKGMFLS
DLIQEGNIGLLKAIEKFDYRKGFKFSTYATWWIRQSITRYLAENTRTIRIPLHIIETIYK
ISKLISNKFYQEYGRDPTLEELSKETGLSIEKLNYIFKIMKQPISLETNIGEEDDSTLRD
FIEDQKALKPDEITFNQALSEKVRELLKSLSPREEKIIRLRFGIGERESYTLEEVGNKFG
VTKERIRQIENIALRKLKHPQRIKFLKNFLIYSS
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgagcctccgaaacaaaaaaaccttttgtctttttgaagaagaggaaatgctcttagag
gaggtttcttcagaaaatttctggctacctgaagaagaggaaaaaaggtctggagttaaa
gacgaagaccctataaagatttattttaaggaagttttttctcataaacttcttaccaaa
gaagatgaaataaggataggaaggactatagaagaaaaggaaagggagatattgagtgag
gtcctcagttattatgctactactgccaagttttttcatctggttattcaatcagaaaga
catggcaagttaggactgctttttaaggactgtgatgaattacaaaaacataaagaaaag
tttgaacattggatacaaagtttaaagcaaagcttaagtgacattttagagtcttttaat
tctcatggtgttaaccctgagctgttggaaaagaccatagaacttatttatcaagtaaga
ccaagtaaactgctcttagatgagctttgttgtgagattttagaaacctatcaaagggtt
aacaacctaaatagattaaaaaataaactgcaaactaaatacgagatcaagcctatcacg
atagaaaaaattttttcagttaacggaagacagattaattttctccgtttagcaaaaaga
ttttccatcgataagatagatttagacaagctggtaaaagaagtaaacgaacattgtaag
tttatgaagcattttgatgaattctttggagagcccttagagaaggtataccaaagtgga
gaaaagatttttaaagcctgtcaagttataaaggcctgcaaagaggagttggtaaaatct
aatcttaggcttatcatttctatagcccgcaagtattctcctaaagggatgtttctttct
gatttaatccaggaaggaaacataggtcttcttaaagccatagaaaaatttgattaccga
aaaggatttaagtttagcacctatgcaacctggtggataagacagtctatcaccaggtat
ctggcagaaaataccaggaccataaggatcccccttcatataatagaaactatatacaaa
ataagtaagcttatttctaacaagttttatcaagaatatggtagagatccaactttagaa
gaactttctaaggagacaggcctttctatagaaaaacttaactacatcttcaaaattatg
aaacaacctatttctctggaaactaacataggagaagaagacgattctacactaagagat
ttcatagaagaccagaaagctttaaaacctgatgaaattacctttaaccaagctctatca
gaaaaagtaagagaacttctaaagagtttgtcccccagggaggaaaaaattataaggcta
aggtttggaataggtgaaagagaatcctacactttagaggaggttggaaacaagtttggg
gttactaaagaaaggatcagacagatagaaaacatcgccctgcgtaaacttaaacatcct
caaaggataaagtttttaaagaattttcttatttatagttcttaa

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