Thermodesulfobacterium commune: HL41_04220
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Entry
HL41_04220 CDS
T03212
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
tcm
Thermodesulfobacterium commune
Pathway
tcm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tcm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HL41_04220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcm03021
]
HL41_04220
Transcription machinery [BR:
tcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HL41_04220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AIH04039
UniProt:
A0A075WRV9
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Position
complement(812928..814472)
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AA seq
514 aa
AA seq
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MSLRNKKTFCLFEEEEMLLEEVSSENFWLPEEEEKRSGVKDEDPIKIYFKEVFSHKLLTK
EDEIRIGRTIEEKEREILSEVLSYYATTAKFFHLVIQSERHGKLGLLFKDCDELQKHKEK
FEHWIQSLKQSLSDILESFNSHGVNPELLEKTIELIYQVRPSKLLLDELCCEILETYQRV
NNLNRLKNKLQTKYEIKPITIEKIFSVNGRQINFLRLAKRFSIDKIDLDKLVKEVNEHCK
FMKHFDEFFGEPLEKVYQSGEKIFKACQVIKACKEELVKSNLRLIISIARKYSPKGMFLS
DLIQEGNIGLLKAIEKFDYRKGFKFSTYATWWIRQSITRYLAENTRTIRIPLHIIETIYK
ISKLISNKFYQEYGRDPTLEELSKETGLSIEKLNYIFKIMKQPISLETNIGEEDDSTLRD
FIEDQKALKPDEITFNQALSEKVRELLKSLSPREEKIIRLRFGIGERESYTLEEVGNKFG
VTKERIRQIENIALRKLKHPQRIKFLKNFLIYSS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccgaaacaaaaaaaccttttgtctttttgaagaagaggaaatgctcttagag
gaggtttcttcagaaaatttctggctacctgaagaagaggaaaaaaggtctggagttaaa
gacgaagaccctataaagatttattttaaggaagttttttctcataaacttcttaccaaa
gaagatgaaataaggataggaaggactatagaagaaaaggaaagggagatattgagtgag
gtcctcagttattatgctactactgccaagttttttcatctggttattcaatcagaaaga
catggcaagttaggactgctttttaaggactgtgatgaattacaaaaacataaagaaaag
tttgaacattggatacaaagtttaaagcaaagcttaagtgacattttagagtcttttaat
tctcatggtgttaaccctgagctgttggaaaagaccatagaacttatttatcaagtaaga
ccaagtaaactgctcttagatgagctttgttgtgagattttagaaacctatcaaagggtt
aacaacctaaatagattaaaaaataaactgcaaactaaatacgagatcaagcctatcacg
atagaaaaaattttttcagttaacggaagacagattaattttctccgtttagcaaaaaga
ttttccatcgataagatagatttagacaagctggtaaaagaagtaaacgaacattgtaag
tttatgaagcattttgatgaattctttggagagcccttagagaaggtataccaaagtgga
gaaaagatttttaaagcctgtcaagttataaaggcctgcaaagaggagttggtaaaatct
aatcttaggcttatcatttctatagcccgcaagtattctcctaaagggatgtttctttct
gatttaatccaggaaggaaacataggtcttcttaaagccatagaaaaatttgattaccga
aaaggatttaagtttagcacctatgcaacctggtggataagacagtctatcaccaggtat
ctggcagaaaataccaggaccataaggatcccccttcatataatagaaactatatacaaa
ataagtaagcttatttctaacaagttttatcaagaatatggtagagatccaactttagaa
gaactttctaaggagacaggcctttctatagaaaaacttaactacatcttcaaaattatg
aaacaacctatttctctggaaactaacataggagaagaagacgattctacactaagagat
ttcatagaagaccagaaagctttaaaacctgatgaaattacctttaaccaagctctatca
gaaaaagtaagagaacttctaaagagtttgtcccccagggaggaaaaaattataaggcta
aggtttggaataggtgaaagagaatcctacactttagaggaggttggaaacaagtttggg
gttactaaagaaaggatcagacagatagaaaacatcgccctgcgtaaacttaaacatcct
caaaggataaagtttttaaagaattttcttatttatagttcttaa
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