Thermodesulfobacterium commune: HL41_05305
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Entry
HL41_05305 CDS
T03212
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tcm
Thermodesulfobacterium commune
Pathway
tcm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tcm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HL41_05305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcm03021
]
HL41_05305
03400 DNA repair and recombination proteins [BR:
tcm03400
]
HL41_05305
Enzymes [BR:
tcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HL41_05305
Transcription machinery [BR:
tcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HL41_05305
DNA repair and recombination proteins [BR:
tcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HL41_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
UPF0552
Motif
Other DBs
NCBI-ProteinID:
AIH04210
UniProt:
A0A075WT71
LinkDB
All DBs
Position
complement(1026465..1027430)
Genome browser
AA seq
321 aa
AA seq
DB search
MKREIELIKPEEIKVHKDSQFPYYGKFIIEPLERGYGITLGNALRRVLLSSIPGYSITEV
RIEGAPHEFTSLPGVVEDVTEIILNLKGVRFKLEGDGPFYFKLEKIGEGEVKAGDIQVED
KGIIVNPDAHIATLTKDGKLVMEIKVEKGRGYVPAEYNKNNEIGVILVDGLFSPITKVNF
TVTQARVGKSSDYDSLVLEIYTDGTIDPKEALVKAAKILVEQFMVFLGEEKIGLETTTAD
VSTTQNILNLPIEELELSGRAYNCLKAANINYIGQLVQKTESELLKLRSFGKKSLDEIVE
KLNRFNLKLGMTDLKWKPPKD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggaaatagagcttattaagcctgaagagattaaagttcataaggatagccag
tttccttattatgggaaatttattatagagcctttagaaagaggatacggcattactttg
ggaaacgctttaagaagggttctgctttcatctatacctggttattctattactgaggta
aggatagaaggtgctcctcatgagtttaccagtttgcctggagtagttgaggatgttaca
gaaattatactaaatttaaagggagtaaggtttaagcttgaaggagatggccctttttat
tttaagctcgaaaagataggagagggtgaagtaaaggcaggagatattcaggttgaagat
aaagggattatcgtaaatcctgatgctcatatagcaactttaacaaaagatggtaagttg
gtgatggagattaaggtagaaaaaggtagagggtacgttccagcagaatataacaaaaat
aatgagataggggttatcctagttgatggtttgttttccccgattaccaaggtaaatttt
acggttactcaggctcgtgtagggaaaagcagtgattatgacagtttagtattagagata
tatacagacggaactatagatcctaaagaggctttagttaaggctgctaagattttagta
gaacagtttatggtatttttaggtgaggaaaaaatagggttagagacaaccactgcggat
gttagtactactcagaatattttaaaccttcctatagaggagcttgaactttctggcagg
gcatataattgtttgaaggctgctaacataaactatataggccagttggtacaaaagact
gaatctgagcttttaaagcttagaagttttggtaagaaatctttagacgaaatagtagaa
aaacttaacaggtttaatctaaagcttggcatgacagaccttaagtggaaacctccaaaa
gattag
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