Thermodesulfobacterium commune: HL41_05615
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Entry
HL41_05615 CDS
T03212
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tcm
Thermodesulfobacterium commune
Brite
KEGG Orthology (KO) [BR:
tcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcm03016
]
HL41_05615
Enzymes [BR:
tcm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HL41_05615
Transfer RNA biogenesis [BR:
tcm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HL41_05615
Prokaryotic type
HL41_05615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AIH04266
UniProt:
A0A075WTR7
LinkDB
All DBs
Position
complement(1074532..1075338)
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AA seq
268 aa
AA seq
DB search
MAEVNIRNIRLFIAYDGTNYLGWQIQPKGPTVQGVIQEVLSKILGHKVTLKASGRTDAGV
HALHQVAHFLTTSDRPLEIIFKALNSLLPKDISVWKVEEVDFKFHAQKHAYKKTYVYQIY
NYPIKNPLLRLYSWWVPEPLDLEAMKSCLPLIIGEKDFASFRKAGTEVKTTVRTIYQATL
ERSLENSNMIVFTIEGRGFMRYMVRNLVGALVEVGKGRLTVEDFENILNAKDRKVAPPPA
PPQGLILKKVEYLDVKVLESYPPFEVKI
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggtcaacataagaaatattcgattgtttatagcttatgatggaactaattat
ttaggttggcagatacaacctaaggggccaacggtccaaggagtcatccaagaggtttta
tctaagatcctcggacataaagtaacgttgaaggcttcagggagaacagatgccggggtt
catgcccttcatcaagtcgctcattttttgactacttcagataggcctttagagataatc
tttaaagctttaaacagcctcttgcctaaggacatttccgtttggaaggtagaggaggtt
gattttaagtttcatgcacaaaagcatgcatataaaaaaacttatgtctatcagatttat
aattatcccataaaaaaccctcttttgagactttattcttggtgggtgcccgagccgctt
gatttagaagccatgaaaagttgtttgcctttaattatcggagaaaaagattttgccagt
tttagaaaggctggaacagaggttaaaactacggttagaacgatttatcaggcaacctta
gaaaggtcattagaaaattctaacatgatcgtttttacgatagagggtaggggttttatg
cgttatatggtgagaaaccttgtaggagctttggttgaagtaggaaaggggcgtcttacg
gtagaggatttcgaaaacatccttaacgcaaaagatagaaaagtagcaccacctcctgct
cctcctcaaggtttgatcctgaaaaaggttgaatatcttgacgttaaggtgttagagagt
tatcctccttttgaggttaaaatctaa
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