Thermodesulfobacterium commune: HL41_06195
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Entry
HL41_06195 CDS
T03212
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tcm
Thermodesulfobacterium commune
Brite
KEGG Orthology (KO) [BR:
tcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcm03400
]
HL41_06195
DNA repair and recombination proteins [BR:
tcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HL41_06195
Archaeal homologous recombinant proteins
HL41_06195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
nSTAND3
TsaE
GTP_EFTU
CENP-F_leu_zip
nSTAND_NTPase5
NPHP3_N
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AIH04351
UniProt:
A0A075WTZ9
LinkDB
All DBs
Position
1169811..1172813
Genome browser
AA seq
1000 aa
AA seq
DB search
MRPLFLSIKGFGPYLDVKISEQDFKKLNDSRLFLISGEIGAGKTTLFDAIVYALYGTTTI
EKRDPKALVSHLVQHQANLLPEIEFKFFLDGKEYRIIRRLPFKEKGKKLSLWIEGKFFSD
KEKEVNSKIQSLIGLNAEQFKKVFLIPQGEYRKILLAEKKEREELFKIIFDTFLFAELEE
FFKLSLKELQNQIKSNLDRENQIKKLANINELKELEDQIKETKKNLSTLEAEVKNLTKER
ETLSQEISTKQTLLSDLKTFREVLQGLENLFALENEIKQKENRLELLNTVKDYLPFYEDF
KKFKQEIWKVRFKIKDLSAKKIKLSAVLNTLSQNLSQVLSQIPEIEDLKLKVKELKQLEE
KLKEKTALEISVDQLSKEVQSKDEEIFSIREEIKKLKQLLEENSEKLNLLLKIQSWLNEE
KQIRQLLEKFTKLNHFLSKKPELENKVANLSTEIEKLEKQKQEFEVKNLALTVAKALEEG
KPCPVCGSTSHPSPITDKNFTEELNNLEKILTEKKRDFEHYKTQFQTLEIRIDTLQTELS
PYQEEELKEKLAQIEAQKSAYPELVSQYQKNPMIIKILEGKIKEQKNILSKKETEEKDLS
LALENQRKKLLLSKGRLEELTNSLKALLTEEISLEALKRKIVTEEKKITEFETQKTDLEK
QINSLTNQKTAIEQDLKNQKEFLQHLLTNYKAKVFKLLPLKRQKIINRWDEFEELKPEIG
KIQTLEAEIKDFYQKKERLTAEKEKLTQKLESLGLKNLEEIEAQLEVISQNLEALTQKKE
RLELTFKRLNQEIGIAYQKLEQLEGYLKEYQELGKERERLEKRFGFLSKLCDLISGKNPK
GISFHSFVVSMFARTIFQRANEYLKEFSFGRYTFVEDMFLQKNVSIEVFDVYTGTKREVK
TLSGGESFIATLALALGTSDVITYLFKTKPFESLFIDEGFGSLDEKTLEKVITILLGLSE
KSGRIIGVISHLEYMKEVFPLVLEVVKDRSLGSKIRLIQK
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctttatttctttctatcaaagggtttggtccttatttagacgttaaaatcagc
gaacaggattttaaaaagttaaacgacagcaggttgtttctgatctcaggagagataggt
gcagggaaaaccacacttttcgatgccatcgtttatgctctttacggaaccactaccata
gaaaagcgagacccaaaggcccttgtttctcaccttgtccaacaccaggctaacctcctg
ccagaaatagagtttaagtttttcttagacggaaaagaatacagaatcataagaaggctt
cctttcaaagaaaaaggtaaaaaattaagtctatggatagaaggcaaatttttttctgac
aaagaaaaagaggtcaacagtaaaatacagtctttgatagggcttaatgccgagcagttt
aaaaaggtctttcttattcctcaaggagagtatcgtaaaatacttcttgcagaaaaaaag
gaaagagaagagctttttaagatcatctttgacacctttttgtttgccgagttagaagag
ttttttaaacttagtctaaaagaactccaaaaccagatcaagtcaaacttagaccgggaa
aaccagatcaaaaaactggctaacattaacgaattaaaagaactggaagatcaaataaaa
gaaaccaaaaaaaatctttcaaccttagaggcagaggttaaaaaccttactaaggaaaga
gaaactctaagtcaggaaatatcaaccaaacaaaccctcttgtctgacctaaaaaccttt
cgtgaggttttacaagggttagagaatctctttgccttagaaaatgagataaaacaaaaa
gaaaacaggttagaacttttaaacactgttaaagattatttgcctttttatgaagacttt
aaaaaatttaaacaggaaatatggaaagtaaggtttaaaatcaaagatctttctgccaaa
aaaataaaactatctgcagttttaaacaccctttcccaaaatctctcccaagttttatct
caaattccagaaatagaagacctgaagttaaaagtaaaggagttgaaacagttagaagaa
aagcttaaagaaaaaacagcgttagaaatatcagtcgatcaactttctaaggaggttcag
tctaaagacgaagaaattttttcaatccgggaagaaattaaaaaacttaaacaactcctt
gaggaaaactcagaaaaattaaaccttttattaaaaattcaaagctggcttaacgaagaa
aaacaaattagacagctcttagaaaagtttactaaactaaaccatttcttaagtaaaaaa
cctgaattagaaaacaaagtagctaatctttctactgaaatagagaagttagaaaagcaa
aaacaggagtttgaggttaaaaaccttgctttaacggttgctaaagctttagaagaagga
aaaccttgccctgtctgtgggtcaacctctcatccctctcccatcaccgataaaaacttt
actgaagaattaaacaatctagaaaaaattttaacagagaaaaaaagggattttgaacac
tacaaaactcagtttcaaaccttggagataaggattgacacattacaaactgagctctcc
ccttatcaggaagaagaattaaaagaaaaattagcccaaatagaagcacaaaaaagtgct
tatccagagcttgtttcccagtatcaaaagaatcctatgatcattaaaatccttgaaggt
aaaatcaaagaacaaaaaaatatcctttctaaaaaagaaacagaagaaaaagacctctct
ttagccttagaaaaccaaagaaagaagcttttgctatcaaaaggacgcctggaagaatta
acaaatagtttaaaagctctccttacagaagagataagtttagaagctttaaaaagaaaa
atcgttaccgaagaaaaaaagattactgagtttgaaacccaaaaaaccgacttagaaaaa
cagataaacagccttaccaaccaaaaaaccgcgatagaacaggacttaaaaaaccaaaaa
gaatttttgcagcatcttttaacaaactataaagctaaggtttttaaactgttaccccta
aaaagacaaaaaattataaaccggtgggacgagtttgaggaactaaaacctgagataggt
aaaatccaaaccttagaagctgaaataaaagatttttatcagaaaaaagaaaggcttaca
gcagaaaaggaaaaattaacccaaaagcttgaaagtttaggcctaaaaaacttagaggaa
atagaagctcaacttgaggtaatcagtcagaatttagaagcattgacccaaaaaaaagaa
aggttagaacttacctttaaacgcctaaatcaggaaatagggatagcctatcaaaagtta
gagcaacttgagggttatctcaaagaataccaagagttagggaaagaaagagaaagatta
gaaaaaagatttggttttttaagtaaactctgtgatcttatttcagggaaaaaccctaaa
gggatctcttttcattcctttgtagtttctatgtttgcaaggactatttttcaaagggct
aacgaatatctgaaggagttttcctttggaaggtatacctttgtagaggacatgtttttg
caaaaaaacgtctcaatcgaggtgtttgacgtttatacaggaaccaagagggaggttaag
accctttcaggaggtgagtcttttatagctacccttgcccttgcccttggaacttcagac
gttatcacctatctttttaaaaccaagccttttgagtctctgtttatagacgaagggttt
ggtagcttggatgaaaaaaccttagaaaaagtgataaccatcctgcttggtctgtctgaa
aaaagtggaaggattatcggggttatctcccatcttgaatacatgaaagaggtctttcca
ttggttttggaggtggtaaaagaccgtagtcttggcagtaaaatcaggttgatacagaag
tag
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