Thermodesulfobacterium commune: HL41_06255
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Entry
HL41_06255 CDS
T03212
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tcm
Thermodesulfobacterium commune
Brite
KEGG Orthology (KO) [BR:
tcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcm03016
]
HL41_06255
Enzymes [BR:
tcm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HL41_06255
Transfer RNA biogenesis [BR:
tcm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HL41_06255
Prokaryotic type
HL41_06255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Thump_like
Motif
Other DBs
NCBI-ProteinID:
AIH04360
UniProt:
A0A075WTQ4
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All DBs
Position
1182174..1183343
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AA seq
389 aa
AA seq
DB search
MKIKENIEDFIVSEVAEIFPEGKGEYSLYLLKKYNVSTWDALGKIAKLIRIPMDSIGFGG
LKDKKAIAQQFITIKNGPKKDIKTREFELTYLGQTNKPMSKNLLLGNRFEIRVKNFPIDP
KRLDQEVKLIQTYGIANYFDDQRFGSVKSSKEFAAKEIIKGNYERALYLMLAEASPSEIE
KTRKLRDCLKKHWRDFKRCIEFAHLSWEKNLLKFLSEHKPSKRTFKRALNLVDREYLFFL
GNAYQSYLWNEILKEILQELGLNHFKASYLLGEFFFYREVNEEQWKTLKNLKLPLPSPKL
RLELNHSPLDLTRFYDKVCQKEGFTDLTQLRSFIKGMVFKTYPRPAVLFPENLVWEKISD
QEVKFIFFLEKGSYATLVVKRLFYGCTHS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ataaaaataaaagaaaacatcgaagattttatcgtatcagaggttgcagaaatcttccca
gaggggaaaggggaatattctttatacttgctaaaaaaatacaacgtttctacctgggat
gccttaggaaaaatagccaagctcatcagaattccgatggattctatagggtttggaggg
ctaaaggataaaaaagccatagcccagcagtttataaccatcaaaaacggtcccaaaaaa
gacataaaaaccagggaatttgaactgacttatttaggccaaaccaacaaacccatgtcc
aaaaaccttctcttagggaatcgctttgagataagggtaaaaaacttcccgattgaccct
aagagattagaccaagaagttaaacttatccagacctatgggatagccaactattttgac
gaccagagatttggttcagtcaaatcctctaaggagtttgctgcaaaagagatcatcaaa
ggaaactacgaaagggcactttatcttatgcttgctgaggcaagcccctcagagatagaa
aaaactagaaaacttagagactgcctaaaaaaacactggagagattttaaaaggtgtata
gagtttgcccatctatcctgggaaaaaaacttgcttaaatttttgtcagagcataaaccc
tctaaacgaacctttaaaagggctttaaacctggtagaccgggaatacctgtttttctta
ggtaatgcctaccagagctatctctggaacgagatattaaaagagatattgcaagagtta
ggcctaaaccactttaaagcctcctatctgttaggggagtttttcttttaccgcgaggtt
aatgaggagcaatggaaaactctcaaaaacttaaaacttccccttccctctcctaaactg
cgccttgagttaaaccactcccctcttgatctcacaagattttatgacaaggtctgtcaa
aaagagggatttacagacctaactcagttgagaagttttatcaaaggtatggtttttaaa
acctatccccgtccggcggttctctttccagagaacttagtctgggaaaagataagtgat
caggaggttaagtttatcttctttttagaaaaaggttcttatgcaaccctggtggtgaag
aggcttttttatggttgtacgcattcctaa
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