KEGG   Thermodesulfobacterium commune: HL41_06460
Entry
HL41_06460        CDS       T03212                                 
Name
(GenBank) hypothetical protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tcm  Thermodesulfobacterium commune
Pathway
tcm03410  Base excision repair
tcm03430  Mismatch repair
tcm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HL41_06460
   03430 Mismatch repair
    HL41_06460
   03440 Homologous recombination
    HL41_06460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcm03400]
    HL41_06460
DNA repair and recombination proteins [BR:tcm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     HL41_06460
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HL41_06460
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      HL41_06460
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: AIH04390
UniProt: A0A075WTT9
LinkDB
Position
complement(1216099..1217784)
AA seq 561 aa
MSSTKVWVNKQVDLEVLKQFVTKGFFTPFLAQVLINKGFTSIKEAYRFLFPQLSDFGDPF
LIPDMLPAVKRIYQAAISNETIGIYGDSDADGIIGSFVLYDFLVSIGCKVEWLIPSKEKE
GYGFHAKFLPYFKQKGVSLLITVDVGISAADTVNEAKALGIDVIVTDHHEVVEKPDTIVV
SGKLTSKSSPFYHLCGAGVAFTLIRALRKFFYEQGFFRGDNIPQIRKYLELVGLATLADM
VPLLGENRTITFYGFRDLSSPSFLATKLLIENSRLNGTLSEEDLLYRVIPKINAAGRMGT
PELVFQFLKENEETKAKELLTKIEGINQRRQELELEILSSLENLAKREIERYPFIFLAAE
NLPKGLLGLIANRLKNQYQVPAIVVSIENGVGFASGRAPEGLNLFKAVSKCEDLLIQYGG
HKHALGFQVSLNNIEALKSRLADEIKKLTLVSKPEKEIVYVEAEVELAELLHPENLKALT
YLHPYGEAHLPPNILIRNFEVKERFLLKDKHSKFVLKKGLNEIIAIWFNQVVEDERIRLV
LGQPYVNTYRNTLEIKVVDVR
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgtcgtcaaccaaagtttgggttaataaacaggtcgatttagaagttttaaaacaattt
gtaaccaaagggttttttaccccgtttcttgctcaagtcttgatcaataaaggctttacc
agcataaaagaagcttatcgttttctcttcccccagcttagcgattttggtgaccctttt
ttgattcctgacatgttacctgcggtaaaaagaatatatcaggcagctatttctaacgag
accataggtatttatggagactcagacgctgacggcattatcggaagctttgtgttgtat
gattttttggtaagtattggctgtaaggttgaatggcttattcccagtaaggaaaaagaa
ggttatggttttcacgccaaatttttgccttacttcaaacaaaaaggggtaagtctttta
atcacggtagatgtgggaatttctgcagctgataccgtaaacgaggctaaagccttggga
atagatgtgatagttacagaccatcacgaggtagtcgaaaaacctgataccatcgtggtt
tctggaaagcttacatctaaaagctctcccttttatcatctatgcggggcaggggtagct
tttaccctgataagggctctaagaaagtttttttacgagcaagggttttttagaggagac
aacatccctcagatacgaaaataccttgagcttgtgggtttagctaccttagctgacatg
gtgcctctgcttggagaaaatcgcacgattaccttttacgggtttagagacctttcctcc
ccctcttttttggcaacaaaacttcttatagaaaactcaaggctaaacggaaccctttct
gaagaagacctactttatcgggttattcctaagataaacgccgcaggcaggatggggacc
cctgagttggtttttcaatttttaaaagaaaacgaagaaactaaggctaaggagctttta
actaagatagagggtatcaaccagagacgccaggagcttgagttagagatactttcttct
ttagagaatttggctaagagagagatagaacgctatccttttatttttctagctgcagaa
aatcttcccaagggtcttttaggacttattgctaataggttaaaaaaccagtatcaggtt
cctgctatcgttgtttctatagaaaacggagtagggtttgcctctggaagagcccctgag
gggcttaatctttttaaggcagtttctaagtgcgaagaccttcttattcagtatggcgga
cataaacatgcacttggatttcaggtaagtcttaataacatagaggccctaaaatctcgt
ttagctgacgaaatcaaaaaattaactttagtttctaaacctgaaaaagagatagtatat
gttgaggctgaggtagaacttgcagagcttttacatccagaaaacctgaaggctttaact
tatctccatccctacggagaggcccatctccctccaaacattcttatcagaaatttcgag
gtaaaagaaagatttttgttaaaggataaacattctaagtttgtgcttaaaaaaggacta
aatgagatcatcgctatctggtttaaccaggtggtagaagatgaaaggataaggttagtt
ttaggtcaaccttacgtaaacacctacagaaacaccttagaaataaaggtagttgatgta
agatga

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