Thermomonas carbonis: H9L16_01455 Help Entry H9L16_01455       CDS       T06786                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism tcn  Thermomonas carbonis Pathway tcn02020   Two-component system tcn02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:tcn00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     H9L16_01455  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     H9L16_01455  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tcn03021]     H9L16_01455 Transcription machinery [BR:tcn03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      H9L16_01455 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_23 HTH_IclR HTH_Tnp_ISL3 HTH_Crp_2 Sigma70_r4 TetR_N HTH_38 Sigma70_r4_2 HTH_36 HTH_28 HTH_AraC Motif Other DBs NCBI-ProteinID:  QNN70337 UniProt:  A0A7G9SR62 LinkDB All DBs Position 296187..297605 Genome browser AA seq 472 aa AA seqDB search MKQRLSPALQQHLVLTPQLRQAIRLLQLSTVELEAEVAEAVASNPLLDWAEDGEATPGEA HEAREIEAPVDTTVHAAEAEDHWDREAEPWQERIGPSSDRGDDEIEHPAAAESLRDHLLF QLHLGHFSQRDASIGVALIDAIDDDGYLREDLEELARSLRPEIDAGLDELLQVLHRIQQF DPVGVGARDLGECLRLQLRALPVDTAGRDVAMLVTAGPLQRLPKIGIDGVCHELRCERGE AEAAVHLLRSLDPRPGSQHGELPAGTYLTPDCVIWRQQGLWRVALAAGAMPRVAIQHGYE QMIRHASNSDADYLRGRLQEARWLLKGLESRADTLLRVVRCLVREQAAFLEFGEQALHPL TLRSIAAELGLHESTVSRAIARKYVRTPRGTIPLRDFFASGIETEGGGSASSTAIQDMIR KLVAAEDPRKPLSDARLADTLKADGVPVARRTVAKYREALHIPASHERVRIG NT seq 1419 nt NT seq  +upstreamnt  +downstreamnt atgaagcagcgcctctcccccgcgctgcagcagcatctggtcctgacgccgcaactgcgt caggcgatccgcctgctgcagctgtccaccgtcgaactcgaagcggaagtggccgaagcc gtggccagcaatccgctgctcgactgggcggaagacggcgaggccacgcccggcgaagcg cacgaggcgcgcgagatcgaagcgccggtggacaccaccgtccatgccgccgaagccgaa gatcactgggaccgcgaggcggaaccgtggcaggaacgcatcggtccgtcgtcggatcgc ggcgatgacgaaatcgaacatcccgccgcggcggagagcctgcgcgatcacttgttgttc cagctgcacctggggcatttcagccagcgagacgccagcatcggggttgcgctgatcgat gcgatcgatgatgacggctacctgcgcgaagacctggaagaactggcgcgcagcctgcgg cccgagatcgatgccggcctggacgaactcctgcaggtcctgcaccggatccagcagttc gatccggtcggggtgggcgcgcgcgacctcggcgagtgcctgcgcctgcaactgcgcgca ctgccggtcgacaccgccggacgcgatgtcgccatgctggtcaccgccggcccgctgcag cgcctgccgaagatcggtatcgacggggtctgccacgaactgcgctgcgagcgcggcgag gcagaggctgcggtgcatttgctgcgcagcctggatccgcgccccggttcgcaacacggc gaactccccgccggaacctatctcacccccgattgcgtgatctggcgccagcaaggcctg tggcgggttgcactggccgccggcgcgatgccgcgggtggcgatccagcatggctacgaa cagatgatccgccacgccagcaacagcgatgccgattacttgcgcggacgcctgcaggaa gcgcgctggctgttgaaggggctggagtcgcgtgcggacacgttgctgcgggtggtgcgc tgcctggtccgcgagcaggccgcgttcctggaattcggcgaacaggccctgcacccgctg accctgcgcagcatcgctgcggaactgggcctgcacgaatccacggtgtcgcgggcgatc gcgcgcaaatacgtgcgcaccccgcgcgggacgattccgctgcgcgatttcttcgcctcc gggatcgagaccgaaggcggcggcagcgcgtccagtaccgcgatccaggacatgatccgc aagctggtggcagcggaagatccgcgcaagcccttgtcggatgcccgcctcgccgatacg ttgaaggcggacggcgtgccggtggccaggcgcaccgtggcgaaatacagagaggccctg cacatcccggcctctcacgaacgcgtgcgcatcggctga

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