Thermomonas carbonis: H9L16_04385
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Entry
H9L16_04385 CDS
T06786
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tcn
Thermomonas carbonis
Pathway
tcn03420
Nucleotide excision repair
tcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9L16_04385 (uvrD)
03430 Mismatch repair
H9L16_04385 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcn03400
]
H9L16_04385 (uvrD)
Enzymes [BR:
tcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L16_04385 (uvrD)
DNA repair and recombination proteins [BR:
tcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L16_04385 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
H9L16_04385 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QNN70834
UniProt:
A0A7G9SSK9
LinkDB
All DBs
Position
complement(936373..938580)
Genome browser
AA seq
735 aa
AA seq
DB search
MDVSHLLDGLNPAQREAVSAAPGHYLVLAGAGSGKTRVLTHRIAWLHEVYGVPMHGILAV
TFTNKAAGEMRARIAAQLGGEPRGMWVGTFHGIAHRLLRLHWQDAKLPESFQVLDSDDQQ
RLVKRVVQSLELDEARFPPRQIAWWINAQKDEGRRPQHIQPEGDEWASAMLSAYTEYQAR
CERAGLVDFAELLLRAHEVLRDTPALLAHYRHRFGQLLVDEFQDTNAIQYGFVRLLAGET
GQVFVVGDDDQAIYGWRGAKVENVQRFLRDYPGAVTLKLEQNYRSSANILNAANAVIAHN
EDRLGKQLWTDAGEGEQIDLYAAWNEIDEARYVVERISQWVRDGGAHGEAAILYRSNAQS
RAFEEALLAAQVPYRVYGGMRFFERAEIKDALAYLRLVANRDDDAAFERAVNTPTRGIGE
RTLDEVRRTAREHRESLWRASRRLCEQSTLAGRARNALAGFSQLIDLLATETADMPLPEK
IDHVLARSGLREHWAKEGRGGLDSESRIENLDELVSVASRFTRRDDDEAAGLTELVAFLS
YAALEAGEGQTEAGADGVQLMTLHSAKGLEFPLVFLAGLEEGLFPNARSAEEAGRMAEER
RLAYVGITRARQQLVLSHAETRRIHGSDMYGLPSRFLREIPKSLLREIRPKPQANAYAAR
GGYGNQANRFAPRDRGHAAIEVPAVRLGANVRHPTFGTGFVTDVEGSGTHARIQVNFDDV
GSKWLVLAYANLQPA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcccacctcctcgacgggctgaacccggcccagcgcgaggccgtttccgct
gcgcccggtcattacctcgtcctcgccggtgccggctccggcaagacccgcgtgctcacc
catcgcatcgcctggctgcacgaggtgtatggcgtgccgatgcacggcatcctcgcggtc
accttcaccaacaaggcggccggcgagatgcgcgcgcgcatcgccgcgcagctgggtggc
gagccgcgcggcatgtgggtcggcactttccacggtatcgcccaccgcctgctgcgcctg
cactggcaggacgcgaagttgccggaaagtttccaggtgctggacagcgacgaccagcaa
cgcctggtcaaacgcgtggtgcagtcgctggaactggacgaggcgcgcttcccgccgcgg
cagatcgcgtggtggatcaacgcgcagaaggacgagggccgccggccgcagcacatccag
ccggaaggggacgaatgggcctcggcgatgctcagcgcctacaccgaataccaggcgcgt
tgcgaacgcgcgggcctggtcgatttcgccgagctgctgctgcgcgcgcatgaagtgctg
cgtgacacgccggcgttgctggcgcattaccggcaccggttcggccagctgctggtcgac
gaattccaggacaccaatgcgatccagtacggcttcgtgcgcttgcttgccggcgagacc
ggacaagtcttcgtggtcggcgacgacgaccaggcgatctacggatggcgcggcgccaag
gtcgagaacgtgcagcgcttcctgcgcgactacccgggtgccgtcacgctcaagctggaa
cagaattaccgttccagcgccaacatcctcaatgccgccaacgcggtgatcgcacacaac
gaggatcgcctcggcaagcagttgtggaccgatgccggcgagggcgagcagatcgacctg
tacgccgcctggaacgagatcgacgaggcgcgctacgtggtggagcgcatctcgcaatgg
gtgcgcgatggcggtgcccacggcgaggccgcgatcctctaccgcagcaatgcgcagtcg
cgtgccttcgaagaagcgctgttggccgcgcaggtgccgtaccgcgtgtatggcggcatg
cgcttcttcgaacgcgccgaaatcaaggacgcgttggcctacctgcgactggtcgccaat
cgcgacgacgacgcggcgttcgagcgcgcggtcaacacgccgacccgcggcatcggcgag
cgcaccctcgacgaagtacggcgcaccgcccgcgagcatcgcgaatcgctgtggcgggcg
tcgcgccgtctgtgcgaacaatcgacattggcgggccgtgcgcgcaacgcgctggccggt
ttctcccagttgatcgacctgctggcgacggaaaccgccgacatgccgttgccggagaag
atcgaccacgtgctggcacgctcaggcctgcgcgagcactgggcgaaggaaggccgcggc
gggctggattccgaatcgcggatcgagaacctggacgaactggtctcggtggcgtcgcgc
ttcacccgccgcgacgacgacgaagccgctggcctgaccgaactggtcgccttcctcagc
tacgccgcactcgaagccggcgaaggccagaccgaagccggtgccgatggcgtgcagctg
atgaccctgcacagcgccaagggcctggaattcccgctggtgttccttgcggggctggag
gaggggttgttcccgaatgcgcgctcggccgaggaagcggggcgcatggcggaagagcgg
cggctggcctacgtcggcatcacccgtgcgcgccagcaactggtgctcagccacgcggag
acccggcgcatccacggcagcgacatgtacggcctgccctcgcgcttcctgcgcgagatc
cccaagtcgctgctgcgcgagatccgcccgaagccgcaggcgaatgcgtacgcggcgcgc
ggtggctacggcaaccaggccaaccgcttcgcgccgcgcgaccgaggccatgcggcgatc
gaagtgccggcggtgcggctcggtgccaacgtgcgccacccgaccttcggcaccggcttc
gtcaccgatgtcgaaggcagcggtacgcatgcgcgcatccaggtgaacttcgacgacgtg
ggcagcaagtggctggtgctggcttacgcgaacctgcaaccggcgtag
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