Thermomonas carbonis: H9L16_05415
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Entry
H9L16_05415 CDS
T06786
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
tcn
Thermomonas carbonis
Pathway
tcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9L16_05415 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcn03400
]
H9L16_05415 (recB)
Enzymes [BR:
tcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H9L16_05415 (recB)
DNA repair and recombination proteins [BR:
tcn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9L16_05415 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QNN71016
UniProt:
A0A7G9ST41
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All DBs
Position
1168263..1171877
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AA seq
1204 aa
AA seq
DB search
MSDIARDPYLDLPLDGLQLIEASAGTGKTFTLATLVTRLVVERGLRIGQILAVTFTEAAT
QELRKRIRERLQLTLDLLDAPAADDDSAEASLTRQLLDAHRTRSEESDESLRRRLRQATL
ETDLAAIFTIHGFCARVLREHAVESGQGFDAATLLTNDRDLRAELAADLWRVHAQDSAGA
DDLAMLWSGGFEDLAKDLPALLREPVLFPPLADAGLAASIDALQRDVLHAQVALQQAWNE
YGEDFLDALAAAIDADVMHRGQYKQTWLANLRQWLQGFACDPWLAGAPHPKLEKLTATAL
AAGTKKGNADRTPVSAHVSNAVAYYLDALLALDGLLARRRGNLLHRIRDDARARLALLKQ
QRRVQTYDDLIDGVADALAQDDAGTLVRQLRTQYAVALVDEFQDTDARQWAIFNRVFGSD
NDAPALFLIGDPKQAIYGFRGGDVHTYLAAANIAEPAPPLSHNFRSRPALLRAVAAMYDN
AGDAAFIDPRIGFFAVEAGGKRRDDGFLRNGEPAPALTVWCAPKPPVDDKGKQKPWSASE
SRELATHACVAAIHAVLSEARAGKALIDGEPVQPGDIAVLVRSHREATMIQQALALVGIA
AVAAGKQSLFATAEARDLHALLLALLHGGDDGRLRTALSTVLVGVDALGIDNLEADADAH
RVWQQRAMGWRERLLRGGPLALIGDLCATHAERLLGLLDGERRMSNYLQLAELLQEAQAG
ALGLHGLVDWLGQRIATADSNDETQLLRLESDARRVQIVTLHKSKGLEYPLVFLPFVGIG
GKPPSPGRCCVAHDAASGQRRLHWGLELPEAEWNTASEAWKHEQLAEDARLLYVGLTRAE
HALWIASGNFFNAVKTPLAKMLGDVDALTNAGIVFDASRSPDQLARLPAESDATIPPARS
VTRRLSHDWWVYSFSQLAKADAGIETASASTLPASGGNDEPDASEDAPVDTDFDARFAGN
RYGVALHAALEHADFAAWRDWRAGDVAPNDEADVIVDALGKEGYGADVLEDGVALTTQFV
GQTLTVALPEGVRLCDVPAFDRRAEIEFQFSLRTTQVDALLQLLHAHGVVRERNGFGLRQ
RLEGLMTGLIDLTYRHAGKWYVLDYKSNRLPAYDAPNLQRAMAHSEYDLQALIYTLALHR
WLRFRLRDGYDYARDFGGIRYVFCRGLDADRDDSPGIHAQRFTPELVDALDALFGGGDAI
GAAA
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgcgcgcgatccgtatctcgatctcccgctggatggcctgcagctgatc
gaagccagcgccggtaccggcaagaccttcaccctggccacgctggtgacgcgccttgtc
gtcgagcgcggcctgcgtattggccagatccttgcggtgaccttcaccgaggcggccacg
caggagctgcgcaagcgcatccgcgaacgcctgcaactcacgctcgatttgctcgacgcg
cctgcagccgacgacgacagcgcggaagcttcgctgacccggcaacttctggatgcgcat
cgcacgcgcagtgaagagagtgacgaatcactgcgtcgccgcttgcgccaggccacgctg
gaaaccgacctcgccgcgatcttcaccatccacggtttctgtgcgcgcgtgctgcgcgaa
cacgcagtggaaagcgggcagggcttcgatgccgccacgctcctgaccaatgaccgcgac
ctgcgcgcggaactcgccgccgacctgtggcgcgtgcatgcacaggacagcgcaggcgcg
gacgatttggcgatgttgtggtcgggtggcttcgaggatctggccaaagacctgcccgca
ttactgcgcgaaccggtgctgtttccgccgctggccgatgccgggctcgccgcaagcatc
gatgctctgcaacgcgacgtgctccacgcacaagtcgcgctgcagcaggcgtggaacgag
tacggcgaagacttcctggatgccctcgccgctgcgatcgatgccgacgtgatgcaccgc
gggcaatacaagcagacatggctggccaacctgcgccagtggctgcagggcttcgcctgc
gatccgtggctggcgggcgcgccgcatcccaagctggaaaaactgactgcgaccgcattg
gcggcgggcaccaagaaaggcaacgcggacaggacgcccgtatcggcgcatgtcagcaac
gcggtggcgtattacctggatgccttgctggcactggatggattgctcgcgcgccgtcgc
ggcaacctgctgcatcgcattcgcgacgatgcgcgcgcacgcctggcgctactcaagcaa
cagcgccgcgtgcagacctacgacgacctcatcgacggcgtcgccgatgcgctggcgcag
gacgatgctggcacgctggtgcggcaactgcgcacgcaatacgcggtcgctttggtcgac
gaattccaggacaccgacgcacgccagtgggcgatcttcaatcgcgtgttcgggagcgat
aatgatgcgcccgcactgtttttgatcggtgatcccaagcaggcgatctacggattccgc
ggcggcgacgtccacacctatcttgctgcggcgaacatcgccgagcctgcgccgccgctg
tcgcataacttccgttcgcgtcctgcgctgctccgcgccgttgccgcgatgtacgacaac
gctggcgatgcggccttcatcgatccgcgcatcggtttcttcgcggttgaagccggcggc
aagcgtcgcgacgacgggttcctacgcaatggcgaacccgcacccgcgctgacggtctgg
tgcgcacccaaaccaccggtcgacgacaagggcaagcagaagccgtggagcgcgagcgaa
tcgcgcgaactggcgacccatgcctgcgtcgcggcgatccacgccgtactgtcggaggcg
cgcgccggcaaggcactgatcgacggcgaacccgtgcagcccggcgacatcgccgtgctg
gtgcgcagccatcgcgaggccacgatgatccagcaggcgctggccttggtcggcatcgcc
gcggtggcggccggcaagcagagcctgttcgccaccgccgaagcgcgcgacctgcacgcg
ctgctgctggccttgttgcacggcggcgatgacggccgcctgcgcaccgcgctgtcgacg
gtgctggtcggcgtggatgcgctcggcatcgacaacctcgaggcagatgctgacgcgcac
cgcgtctggcagcaacgcgcgatgggttggcgcgaacgcctgttgcgcggcggcccgctc
gcgttgatcggcgacctctgcgcgacgcatgcggaacgcctgctcggcctgctcgatggc
gagcgacgcatgagcaattacctgcagctcgccgaactactgcaggaagcgcaggccggc
gcgctcgggctgcatggcctggtcgactggctgggccagcgcatcgccaccgcggattcc
aacgacgaaacgcaactgctgcggctggagtccgacgcgcgccgcgtacagatcgtcacc
ctgcacaaaagcaaggggctggagtatccgctggtgttcctgcccttcgtcggcatcggc
ggcaagccgccatcgcccggtcgctgttgcgtggcgcatgacgccgccagcggccagcgt
cgcctgcactggggtctggagctgccggaagcggaatggaacaccgccagcgaggcatgg
aagcacgagcaactggccgaggatgcgcgcctgctctacgtgggcctgacgcgcgccgag
cacgcgctgtggatcgccagcggaaatttcttcaacgcagtgaagacgccgctggcgaag
atgctgggcgatgtcgatgcgttgaccaacgccggcatcgtgttcgatgcatcgcgctcg
cccgatcagctggcacggttgcccgccgaatccgatgccacgatcccgcccgcgcgcagc
gtcacgcgccggctctcgcacgactggtgggtctacagcttcagccagttggccaaggcc
gatgccggcatcgagaccgccagtgcgtccaccttgcccgcgagcggaggcaacgacgaa
ccggacgccagcgaagacgcgccggtcgacaccgacttcgacgcacgcttcgccggcaac
cgctacggcgtggccctgcacgcggcgctggaacatgcggacttcgcggcatggcgcgac
tggcgcgcgggcgatgttgcgccgaacgacgaggccgacgtcatcgtcgacgcgctcggc
aaggaaggctatggcgccgacgtgctggaggacggcgtcgcgctgaccacgcagttcgtc
gggcagacgctgaccgtcgcgctgccggaaggcgttcgcctgtgcgatgtgcctgccttt
gatcgccgcgcggaaatcgaattccagttctcgctgcgcacgacccaggtcgatgcgctg
ctgcaactgctgcacgcgcatggcgtggtgcgcgagcgcaacggcttcggcctgcgccag
cggctggaaggcctgatgaccggcctgatcgacctgacctatcgccatgccggcaagtgg
tacgtgctcgactacaaatccaaccgcctgcccgcgtatgacgcccccaacctgcagcgc
gccatggcgcacagcgaatacgacctgcaggcgctgatctacacgctcgcccttcaccgc
tggctgcgcttccgcctgcgcgacggctacgactacgcccgcgatttcggcggcatccgc
tacgtgttctgtcgcgggctggatgcggatcgagacgactcgcccggcatccatgcgcaa
cgcttcaccccggaactcgtcgatgcgctggacgcgttgttcggcggcggcgatgccatc
ggagccgccgcatga
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