Thermobacillus composti: Theco_1022
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Entry
Theco_1022 CDS
T02394
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
tco
Thermobacillus composti
Brite
KEGG Orthology (KO) [BR:
tco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tco03021
]
Theco_1022
Transcription machinery [BR:
tco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Theco_1022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_DeoR
Sigma70_ECF
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AGA57201
UniProt:
L0EBZ0
LinkDB
All DBs
Position
1060375..1061190
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AA seq
271 aa
AA seq
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MLLLLIKRLFGKPGSGGSARDGAQAPPETVVARIRAGDDALRESFIADYRPYIAKAASRF
CKRYIDPSRDDEYSIALAAFNEAIDGYDDNAGKSFLGFADTVIRRRLIDYVRKEQRHARS
LPMSAFEGEQGGESPVNAAETAGAMDAYVSERLSESRRLEIEALAERLERCGISFTDLAD
RSPRHADSRAMLLGISAELASRPELMAVMERHGRLPIKELMEYCQVSRKTLERNRKYIMA
TALILSGDFPLLQSYLQPAVQEAAVSREVGS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
ttgttacttctactgatcaagcggctgttcggcaagcccggatccggcggaagcgcgcgg
gatggcgcgcaggcaccgccggagacggtcgtggcccgcatccgggcaggggacgacgcg
ctccgcgaatcgttcatcgcggactaccgcccctatatcgccaaagcggcaagccgcttc
tgcaaacgatatatcgatccgtcgcgcgatgacgaatacagcatcgcccttgccgcgttc
aatgaggcgatcgacggctatgatgacaacgccggaaaatcgttcctcggcttcgccgac
acggtcatccgcagacgtctgatcgactatgtccgcaaggagcagcgccacgcccggtct
ctgccaatgagcgccttcgaaggcgagcagggcggcgaatcgcccgtgaacgccgcggag
acggcaggcgcgatggacgcgtatgtctccgagcggctgtcggaatcccgtcggctggag
atcgaagcgctggccgagcggcttgagcgatgcggcatctcgttcaccgatctcgctgac
cggtcgccccggcatgccgactcccgcgccatgctgctcggcatcagcgcggagctggcg
agccggcccgaactgatggccgtcatggagcggcacggccgtctgccgatcaaggaactg
atggaatactgccaggtatcgcgcaagacgcttgagcgaaaccggaaatatatcatggcg
accgccctgattctgtcgggcgactttccgttgttgcagtcctatttacagccggccgtg
caggaagcggcggtatcgagggaggtgggatcgtga
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